RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
LINC01248-201ENST00000458264 INSL6Q9Y581 213 aa17.14■□□□□ 0.33
LINC01248-201ENST00000458264 SGSM2O43147 1006 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 FIBPO43427 364 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 CAND2O75155 1236 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 GNAT1P11488 350 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC01248-201ENST00000458264 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
LINC01248-201ENST00000458264 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
LINC01248-201ENST00000458264 TREHO43280 583 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 SMARCA1P28370 1054 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
LINC01248-201ENST00000458264 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
LINC01248-201ENST00000458264 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 SEPT8Q92599 483 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 CUL5Q93034 780 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
LINC01248-201ENST00000458264 GPR20Q99678 358 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 C1QTNF1Q9BXJ1 281 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 MUC3AQ02505 3323 aa17.12■□□□□ 0.33
LINC01248-201ENST00000458264 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 DDAH1O94760 285 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 KIF5BP33176 963 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 ANTXR2P58335 489 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 HTRA4P83105 476 aaPredicted RBP17.11■□□□□ 0.33
LINC01248-201ENST00000458264 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
LINC01248-201ENST00000458264 MYOCDQ8IZQ8 938 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 SMARCC2Q8TAQ2 1214 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 SENP7Q9BQF6 1050 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
LINC01248-201ENST00000458264 ZNF215Q9UL58 517 aaPredicted RBP17.11■□□□□ 0.33
LINC01248-201ENST00000458264 MYH7BA7E2Y1 1941 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 PCNX4Q63HM2 1172 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 NLRX1Q86UT6 975 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 GIMAP8Q8ND71 665 aaPredicted RBP17.1■□□□□ 0.33
LINC01248-201ENST00000458264 FBXO22Q8NEZ5 403 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
LINC01248-201ENST00000458264 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
LINC01248-201ENST00000458264 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
LINC01248-201ENST00000458264 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
LINC01248-201ENST00000458264 GNAQP50148 359 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 UTP14CQ5TAP6 766 aaKnown RBP17.09■□□□□ 0.33
LINC01248-201ENST00000458264 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 TMTC2Q8N394 836 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
LINC01248-201ENST00000458264 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
LINC01248-201ENST00000458264 COL4A4P53420 1690 aaPredicted RBP17.08■□□□□ 0.32
LINC01248-201ENST00000458264 MEIS2O14770 477 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 CTSHP09668 335 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 APBB2Q92870 758 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 TOP1MTQ969P6 601 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 MYL10Q9BUA6 226 aa17.08■□□□□ 0.32
LINC01248-201ENST00000458264 TCF20Q9UGU0 1960 aaKnown RBP17.08■□□□□ 0.32
LINC01248-201ENST00000458264 TRANK1O15050 2925 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
LINC01248-201ENST00000458264 PRC1O43663 620 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 ADAM17P78536 824 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 PTPROQ16827 1216 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 TRIM50Q86XT4 487 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 YME1L1Q96TA2 773 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 UBE2ZQ9H832 354 aaPredicted RBP17.07■□□□□ 0.32
LINC01248-201ENST00000458264 RAPGEFL1Q9UHV5 662 aa17.07■□□□□ 0.32
LINC01248-201ENST00000458264 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 CALM1P0DP23 149 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 CALM2P0DP24 149 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 CALM3P0DP25 149 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 MCM5P33992 734 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 SP4Q02446 784 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 EPC2Q52LR7 807 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 SRBD1Q8N5C6 995 aaKnown RBP17.06■□□□□ 0.32
LINC01248-201ENST00000458264 GPRASP2Q96D09 838 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 MRPL38Q96DV4 380 aaKnown RBP17.06■□□□□ 0.32
LINC01248-201ENST00000458264 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
LINC01248-201ENST00000458264 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms