RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 TCTN1Q2MV58 587 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 CELF3Q5SZQ8 465 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 SESTD1Q86VW0 696 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 RAB11FIP4Q86YS3 637 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 MAP3K14Q99558 947 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 HDAC6Q9UBN7 1215 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 GTF2IRD1Q9UHL9 959 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 ARIH1Q9Y4X5 557 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
CHCHD3-204ENST00000457942 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 BAIAP3O94812 1187 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 PLEKHA8P1O95397 391 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 F2P00734 622 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 CALM1P0DP23 149 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 CALM2P0DP24 149 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 CALM3P0DP25 149 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 IL9P15248 144 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 MYSM1Q5VVJ2 828 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 AFAP1L1Q8TED9 768 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 GPKOWQ92917 476 aaPredicted RBP eCLIP18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 DOCK5Q9H7D0 1870 aa18.15■□□□□ 0.5
CHCHD3-204ENST00000457942 PI4K2BG5E9Z4 385 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 TGFB3P10600 412 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 HSDL1Q3SXM5 330 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 USP17L6PQ6QN14 398 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 LRRC8DQ7L1W4 858 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 MICU3Q86XE3 530 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 SUGCTQ9HAC7 445 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 RTEL1Q9NZ71 1219 aa18.14■□□□□ 0.49
CHCHD3-204ENST00000457942 PPFIA4O75335 1185 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 STAM2O75886 525 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 SELPP16109 830 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 SP2Q02086 613 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 SYNE3Q6ZMZ3 975 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 GJD3Q8N144 294 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 DHX38Q92620 1227 aaKnown RBP18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 BRWD1Q9NSI6 2320 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 SIP14410 1827 aa18.13■□□□□ 0.49
CHCHD3-204ENST00000457942 WDFY4Q6ZS81 3184 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 LINC01553A4QN01 128 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 SMARCA1P28370 1054 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 LIFRP42702 1097 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 NEDD9Q14511 834 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 GPNMBQ14956 572 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 FRMPD4Q14CM0 1322 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 PIEZO1Q92508 2521 aa18.12■□□□□ 0.49
CHCHD3-204ENST00000457942 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 HAS3O00219 553 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 FIBPO43427 364 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 NBNO60934 754 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 CKBP12277 381 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 HOXD8P13378 290 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 SP4Q02446 784 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 PTK7Q13308 1070 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 CSPP1Q1MSJ5 1256 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 CNKSR3Q6P9H4 555 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 EP400NLQ6ZTU2 488 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 FAM178BQ8IXR5 827 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 C17orf80Q9BSJ5 609 aa18.11■□□□□ 0.49
CHCHD3-204ENST00000457942 C17orf102A2RUQ5 167 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 H3BQ06 376 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 CDC45O75419 566 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 GJB5O95377 273 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 PARNO95453 639 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 LGALS2P05162 132 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 ZNF200P98182 395 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 PTCRAQ6ISU1 281 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 NLRX1Q86UT6 975 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 INPP4AQ96PE3 977 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 NEK1Q96PY6 1258 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
CHCHD3-204ENST00000457942 SPDYE3A6NKU9 549 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 H3BRB1 525 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 PIK3CDO00329 1044 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 MEIS2O14770 477 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 ICAM3P32942 547 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 MRE11P49959 708 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 ERVK-21P61565 698 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 LEXMQ3ZCV2 418 aa18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-204ENST00000457942 XRRA1Q6P2D8 792 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms