RNA–Protein interactions for RNA: ENST00000454664.2

CNKSR3-203, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 776 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-203ENST00000454664 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 ZHX3Q9H4I2 956 aa5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 SAP30BPQ9UHR5 308 aaKnown RBP5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 ZNF451Q9Y4E5 1061 aa5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 PCDHA9Q9Y5H5 950 aa5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
CNKSR3-203ENST00000454664 AQP7O14520 342 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 EPB41L2O43491 1005 aaKnown RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 GAS7O60861 476 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ULK1O75385 1050 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 NFICP08651 508 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 SLFN14P0C7P3 912 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ADH5P11766 374 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 VCAM1P19320 739 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 CD247P20963 164 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 SERPINB3P29508 390 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 MAN1A1P33908 653 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ERVK-21P61565 698 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 MAP4K2Q12851 820 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 KLF1Q13351 362 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 PCBP2Q15366 365 aaKnown RBP eCLIP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 NTRK3Q16288 839 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 HP1BP3Q5SSJ5 553 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 GPR158Q5T848 1215 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 CCDC70Q6NSX1 233 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 CTR9Q6PD62 1173 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 C11orf74Q86VG3 221 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 SIAH1Q8IUQ4 282 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 IFNL2Q8IZJ0 200 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 SMC1BQ8NDV3 1235 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ADCY4Q8NFM4 1077 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 BAHD1Q8TBE0 780 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 GJA10Q969M2 543 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 RCC1LQ96I51 464 aaKnown RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 GPR101Q96P66 508 aaPredicted RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 HERPUD2Q9BSE4 406 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 MKRN2Q9H000 416 aaKnown RBP5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 PLCB1Q9NQ66 1216 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ANLNQ9NQW6 1124 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 SMC4Q9NTJ3 1288 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 LUZP4Q9P127 313 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 FRMD4BQ9Y2L6 1034 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 ZKSCAN5Q9Y2L8 839 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
CNKSR3-203ENST00000454664 RPGRIP1LQ68CZ1 1315 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 SCRIBQ14160 1630 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 CBX4O00257 560 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 KCNH1O95259 989 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 IL33O95760 270 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 CFBP00751 764 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 RNASE1P07998 156 aaKnown RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 SNRPB2P08579 225 aaKnown RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 FAM200BP0CF97 657 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ZNF853P0CG23 659 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ITGA4P13612 1032 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 NAT1P18440 290 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 RAB6AP20340 208 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 HOXC12P31275 282 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 HALP42357 657 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 LSSP48449 732 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 GFRA1P56159 465 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 RIPK4P57078 832 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 OCRLQ01968 901 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 GUCY1A3Q02108 690 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 DSG1Q02413 1049 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 RING1Q06587 406 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ADCY1Q08828 1119 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 BNIP3Q12983 259 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 CHAF1AQ13111 956 aaPredicted RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 SF1Q15637 639 aaKnown RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 CYP27C1Q4G0S4 372 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ALFQ53S48 1182 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 PPM1JQ5JR12 505 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ZKSCAN2Q63HK3 967 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 GTF2IRD2BQ6EKJ0 949 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 PGM2L1Q6PCE3 622 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 C1orf228Q6PIY5 440 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 OGFOD3Q6PK18 319 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 EP400NLQ6ZTU2 488 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 GET4Q7L5D6 327 aaPredicted RBP5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 GTF2IRD2Q86UP8 949 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ZNF354CQ86Y25 554 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 CILP2Q8IUL8 1156 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 HID1Q8IV36 788 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 ARHGEF39Q8N4T4 335 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 TEX19Q8NA77 164 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 BRF1Q92994 677 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 RUNDC1Q96C34 613 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 FAXDC2Q96IV6 333 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 TNIP3Q96KP6 325 aa5.27□□□□□ -1.57
CNKSR3-203ENST00000454664 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms