RNA–Protein interactions for RNA: ENST00000454664.2

CNKSR3-203, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 776 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-203ENST00000454664 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
CNKSR3-203ENST00000454664 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
CNKSR3-203ENST00000454664 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
CNKSR3-203ENST00000454664 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
CNKSR3-203ENST00000454664 FOXD1Q16676 465 aa16.82■□□□□ 0.28
CNKSR3-203ENST00000454664 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
CNKSR3-203ENST00000454664 MSH5O43196 834 aa15.96■□□□□ 0.15
CNKSR3-203ENST00000454664 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
CNKSR3-203ENST00000454664 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
CNKSR3-203ENST00000454664 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
CNKSR3-203ENST00000454664 ADRA2BP18089 450 aa15.38■□□□□ 0.05
CNKSR3-203ENST00000454664 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
CNKSR3-203ENST00000454664 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
CNKSR3-203ENST00000454664 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
CNKSR3-203ENST00000454664 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
CNKSR3-203ENST00000454664 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
CNKSR3-203ENST00000454664 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
CNKSR3-203ENST00000454664 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CNKSR3-203ENST00000454664 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
CNKSR3-203ENST00000454664 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
CNKSR3-203ENST00000454664 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
CNKSR3-203ENST00000454664 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
CNKSR3-203ENST00000454664 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
CNKSR3-203ENST00000454664 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
CNKSR3-203ENST00000454664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
CNKSR3-203ENST00000454664 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
CNKSR3-203ENST00000454664 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
CNKSR3-203ENST00000454664 CAPN15O75808 1086 aa12.57□□□□□ -0.4
CNKSR3-203ENST00000454664 DSG3P32926 999 aa12.56□□□□□ -0.4
CNKSR3-203ENST00000454664 POTEHQ6S545 545 aa12.55□□□□□ -0.4
CNKSR3-203ENST00000454664 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
CNKSR3-203ENST00000454664 APLP2Q06481 763 aa12.37□□□□□ -0.43
CNKSR3-203ENST00000454664 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
CNKSR3-203ENST00000454664 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
CNKSR3-203ENST00000454664 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
CNKSR3-203ENST00000454664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
CNKSR3-203ENST00000454664 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
CNKSR3-203ENST00000454664 ABCB7O75027 752 aa12.21□□□□□ -0.45
CNKSR3-203ENST00000454664 KCNA4P22459 653 aa12.21□□□□□ -0.45
CNKSR3-203ENST00000454664 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CNKSR3-203ENST00000454664 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
CNKSR3-203ENST00000454664 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
CNKSR3-203ENST00000454664 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
CNKSR3-203ENST00000454664 POLA2Q14181 598 aa11.86□□□□□ -0.51
CNKSR3-203ENST00000454664 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
CNKSR3-203ENST00000454664 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
CNKSR3-203ENST00000454664 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
CNKSR3-203ENST00000454664 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
CNKSR3-203ENST00000454664 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
CNKSR3-203ENST00000454664 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
CNKSR3-203ENST00000454664 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
CNKSR3-203ENST00000454664 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
CNKSR3-203ENST00000454664 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
CNKSR3-203ENST00000454664 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
CNKSR3-203ENST00000454664 HAX1O00165 279 aa11.41□□□□□ -0.58
CNKSR3-203ENST00000454664 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
CNKSR3-203ENST00000454664 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
CNKSR3-203ENST00000454664 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
CNKSR3-203ENST00000454664 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
CNKSR3-203ENST00000454664 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
CNKSR3-203ENST00000454664 FBLN2P98095 1184 aa11.23□□□□□ -0.61
CNKSR3-203ENST00000454664 ZBTB22O15209 634 aa11.19□□□□□ -0.62
CNKSR3-203ENST00000454664 EVX2Q03828 476 aa11.16□□□□□ -0.62
CNKSR3-203ENST00000454664 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
CNKSR3-203ENST00000454664 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
CNKSR3-203ENST00000454664 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
CNKSR3-203ENST00000454664 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CNKSR3-203ENST00000454664 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
CNKSR3-203ENST00000454664 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
CNKSR3-203ENST00000454664 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
CNKSR3-203ENST00000454664 GABBR2O75899 941 aa10.95□□□□□ -0.66
CNKSR3-203ENST00000454664 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
CNKSR3-203ENST00000454664 CHADLQ6NUI6 762 aa10.89□□□□□ -0.67
CNKSR3-203ENST00000454664 LHX8Q68G74 356 aa10.88□□□□□ -0.67
CNKSR3-203ENST00000454664 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
CNKSR3-203ENST00000454664 CLCN6P51797 869 aa10.78□□□□□ -0.68
CNKSR3-203ENST00000454664 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
CNKSR3-203ENST00000454664 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
CNKSR3-203ENST00000454664 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
CNKSR3-203ENST00000454664 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
CNKSR3-203ENST00000454664 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
CNKSR3-203ENST00000454664 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
CNKSR3-203ENST00000454664 ZRANB1Q9UGI0 708 aa10.56□□□□□ -0.72
CNKSR3-203ENST00000454664 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
CNKSR3-203ENST00000454664 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
CNKSR3-203ENST00000454664 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
CNKSR3-203ENST00000454664 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.73
CNKSR3-203ENST00000454664 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
CNKSR3-203ENST00000454664 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
CNKSR3-203ENST00000454664 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
CNKSR3-203ENST00000454664 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
CNKSR3-203ENST00000454664 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
CNKSR3-203ENST00000454664 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
CNKSR3-203ENST00000454664 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
CNKSR3-203ENST00000454664 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
CNKSR3-203ENST00000454664 POTEMA6NI47 508 aa10.26□□□□□ -0.77
CNKSR3-203ENST00000454664 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
CNKSR3-203ENST00000454664 C7P10643 843 aa10.23□□□□□ -0.77
CNKSR3-203ENST00000454664 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
CNKSR3-203ENST00000454664 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms