RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
CUL3-208ENST00000454323 EEPD1Q7L9B9 569 aa6.92□□□□□ -1.3
CUL3-208ENST00000454323 WHRNQ9P202 907 aa6.92□□□□□ -1.3
CUL3-208ENST00000454323 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
CUL3-208ENST00000454323 CYP1A1P04798 512 aaPredicted RBP6.91□□□□□ -1.3
CUL3-208ENST00000454323 FAM153BP0C7A2 387 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 PAMP19021 973 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 NCAPHQ15003 741 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 ZYXQ15942 572 aaKnown RBP6.91□□□□□ -1.3
CUL3-208ENST00000454323 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
CUL3-208ENST00000454323 ZSWIM2Q8NEG5 633 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 GBP3Q9H0R5 595 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
CUL3-208ENST00000454323 PLAAQ9Y263 795 aa6.91□□□□□ -1.3
CUL3-208ENST00000454323 FAM86C2PA6NEL3 165 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 AURKAO14965 403 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 ADCY3O60266 1144 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 AMHP03971 560 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 ICAM4Q14773 271 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 HS1BP3Q53T59 392 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 CCDC181Q5TID7 509 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 PRAMEF18Q5VWM3 479 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 VHLLQ6RSH7 139 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 CD300LDQ6UXZ3 194 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 MIB1Q86YT6 1006 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 WRNIP1Q96S55 665 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 MTA3Q9BTC8 594 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 SPATA9Q9BWV2 254 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
CUL3-208ENST00000454323 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 CD2APQ9Y5K6 639 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 BACE2Q9Y5Z0 518 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 HS3ST3A1Q9Y663 406 aa6.9□□□□□ -1.3
CUL3-208ENST00000454323 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
CUL3-208ENST00000454323 ZC3H12BQ5HYM0 836 aaKnown RBP6.89□□□□□ -1.31
CUL3-208ENST00000454323 ZBTB38Q8NAP3 1195 aaPredicted RBP6.89□□□□□ -1.31
CUL3-208ENST00000454323 DNERQ8NFT8 737 aa6.89□□□□□ -1.31
CUL3-208ENST00000454323 EPN3Q9H201 632 aa6.89□□□□□ -1.31
CUL3-208ENST00000454323 NPHP3-ACAD11A0A0J9YXS1 232 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 DDX3XO00571 662 aaKnown RBP eCLIP6.88□□□□□ -1.31
CUL3-208ENST00000454323 EPHB4P54760 987 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 ITGA1P56199 1179 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 SLC10A6Q3KNW5 377 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 TM4SF20Q53R12 229 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 PALM2Q8IXS6 379 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 KLHL6Q8WZ60 621 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 SEC14L1Q92503 715 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 L2HGDHQ9H9P8 463 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 GULP1Q9UBP9 304 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 ZNF451Q9Y4E5 1061 aa6.88□□□□□ -1.31
CUL3-208ENST00000454323 WDR33Q9C0J8 1336 aaKnown RBP6.87□□□□□ -1.31
CUL3-208ENST00000454323 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 KCNQ2O43526 872 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 SUSD5O60279 629 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 B4GALT3O60512 393 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 RFPL3O75679 317 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
CUL3-208ENST00000454323 POU3F3P20264 500 aaPredicted RBP6.87□□□□□ -1.31
CUL3-208ENST00000454323 PPP2CBP62714 309 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 PPP2CAP67775 309 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 PRR31Q5SQ13 230 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 ZNF585AQ6P3V2 769 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
CUL3-208ENST00000454323 NINJ1Q92982 152 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 YIPF4Q9BSR8 244 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
CUL3-208ENST00000454323 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 S100BP04271 92 aaPredicted RBP6.86□□□□□ -1.31
CUL3-208ENST00000454323 NTRK1P04629 796 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 NKX3-2P78367 333 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 AMPD2Q01433 879 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 GRB10Q13322 594 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 PPP2R5DQ14738 602 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
CUL3-208ENST00000454323 C21orf62-AS1Q17RA5 79 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 KIAA1211LQ6NV74 962 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 SGSM3Q96HU1 749 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 ZNF341Q9BYN7 854 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 ZNF214Q9UL59 606 aaPredicted RBP6.86□□□□□ -1.31
CUL3-208ENST00000454323 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
CUL3-208ENST00000454323 A0A087X0B3 334 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 IQCA1LA6NCM1 817 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 STXBP3O00186 592 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 PPM1BO75688 479 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 ZNF28P17035 718 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 SLC6A11P48066 632 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 INHBEP58166 350 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 KLF10Q13118 480 aa6.85□□□□□ -1.31
CUL3-208ENST00000454323 FAM126BQ8IXS8 530 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms