RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 IFIH1Q9BYX4 1025 aaKnown RBP25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 JMJD4Q9H9V9 463 aa25.35■■□□□ 1.65
TNFRSF25-208ENST00000453341 SMIM10L2AP0DMW4 78 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 SMIM10L2BP0DMW5 78 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 GHRHRQ02643 423 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 HYAL1Q12794 435 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 NMIQ13287 307 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 IL31RAQ8NI17 732 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 UPF3BQ9BZI7 483 aaKnown RBP25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 VAT1LQ9HCJ6 419 aa25.34■■□□□ 1.65
TNFRSF25-208ENST00000453341 MBTPS2O43462 519 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 CTNNB1P35222 781 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 ASPRV1Q53RT3 343 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 HERC4Q5GLZ8 1057 aaPredicted RBP25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 ZFP91Q96JP5 570 aaPredicted RBP25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 SNX27Q96L92 541 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 MFSD14AQ96MC6 490 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 RNPEPQ9H4A4 650 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 BCAS3Q9H6U6 928 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 KAT14Q9H8E8 782 aa25.33■■□□□ 1.65
TNFRSF25-208ENST00000453341 CCDC171Q6TFL3 1326 aa25.33■■□□□ 1.64
TNFRSF25-208ENST00000453341 CACNA1HO95180 2353 aa25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 C5orf67F2Z3F1 127 aa25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 GRM6O15303 877 aa25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 KCNV1Q6PIU1 500 aa25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 VSIG10LQ86VR7 867 aa25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 RNF41Q9H4P4 317 aaPredicted RBP25.32■■□□□ 1.64
TNFRSF25-208ENST00000453341 H3BRB1 525 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 NCK2O43639 380 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 DHX16O60231 1041 aaKnown RBP25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 PPP1R11O60927 126 aaPredicted RBP25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 CAND2O75155 1236 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 LGALS2P05162 132 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 GTF2F1P35269 517 aaKnown RBP eCLIP25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 PGM5Q15124 567 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 STOX1Q6ZVD7 989 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 RNF135Q8IUD6 432 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 FIBCD1Q8N539 461 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 IL17RAQ96F46 866 aa25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 TUT1Q9H6E5 874 aaKnown RBP25.31■■□□□ 1.64
TNFRSF25-208ENST00000453341 LAMA4Q16363 1823 aa25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 KDM4AO75164 1064 aa25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 TBX10O75333 385 aa25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 HOXA13P31271 388 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 PDE1AP54750 535 aa25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 PRSS33Q8NF86 280 aa25.3■■□□□ 1.64
TNFRSF25-208ENST00000453341 ZFHX2Q9C0A1 2572 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 PARP1P09874 1014 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 BMPR1AP36894 532 aa25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 ENAHQ8N8S7 591 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 APBB2Q92870 758 aa25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 POP1Q99575 1024 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 AMNQ9BXJ7 453 aa25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 MLXIPQ9HAP2 919 aa25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 RC3H2Q9HBD1 1191 aaKnown RBP25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 SETD4Q9NVD3 440 aa25.29■■□□□ 1.64
TNFRSF25-208ENST00000453341 DOCK5Q9H7D0 1870 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 LINC01565O15544 149 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 RB1P06400 928 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 TGFB3P10600 412 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 SMAD4Q13485 552 aaKnown RBP25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 IQCA1Q86XH1 822 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 STAG2Q8N3U4 1231 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 ZSCAN10Q96SZ4 725 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 C11orf84Q9BUA3 381 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 LMAN2LQ9H0V9 348 aa25.28■■□□□ 1.64
TNFRSF25-208ENST00000453341 CSPG5O95196 566 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 CCDC178Q5BJE1 867 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 FAM26DQ5JW98 314 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 IER5LQ5T953 404 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 ANKRD45Q5TZF3 282 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 EDAQ92838 391 aa25.27■■□□□ 1.64
TNFRSF25-208ENST00000453341 B4E1Z4 1266 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 ADAM17P78536 824 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 TRIM50Q86XT4 487 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 CLP1Q92989 425 aaKnown RBP25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 MTMR8Q96EF0 704 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 IGFLR1Q9H665 355 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 MAP3K20Q9NYL2 800 aaKnown RBP25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 ADGRA3Q8IWK6 1321 aa25.26■■□□□ 1.63
TNFRSF25-208ENST00000453341 STXBP3O00186 592 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 ZNF213O14771 459 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 CCND2P30279 289 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 CAMK1Q14012 370 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 TICAM2Q86XR7 235 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 CD207Q9UJ71 328 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 TELO2Q9Y4R8 837 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 PCDHA1Q9Y5I3 950 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 TTC3P53804 2025 aa25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 BAZ2BQ9UIF8 2168 aaKnown RBP25.25■■□□□ 1.63
TNFRSF25-208ENST00000453341 SPTBN4Q9H254 2564 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 TRIM6-TRIM34B2RNG4 842 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 CHRNA1P02708 482 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 ADAM15Q13444 863 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 BMP8AQ7Z5Y6 402 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 RWDD3Q9Y3V2 267 aa25.24■■□□□ 1.63
TNFRSF25-208ENST00000453341 ZBTB5O15062 677 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 MMP1P03956 469 aa25.23■■□□□ 1.63
TNFRSF25-208ENST00000453341 GHRP10912 638 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms