RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
HLCS-205ENST00000448340 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 XPNPEP3Q9NQH7 507 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 KCNH7Q9NS40 1196 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 DYNC1LI2O43237 492 aaPredicted RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 GCFC2P16383 781 aaKnown RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 UBA1P22314 1058 aaKnown RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 GJA9P57773 515 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 NKX3-2P78367 333 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 SP2Q02086 613 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 NEDD9Q14511 834 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 SNX17Q15036 470 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 Q4G0T1 1027 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 PRR16Q569H4 304 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 GJC2Q5T442 439 aaPredicted RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 PPP4R3AQ6IN85 833 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 TLK2Q86UE8 772 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 PLA2G4DQ86XP0 818 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 GIMAP8Q8ND71 665 aaPredicted RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 MBOAT7Q96N66 472 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 AP5M1Q9H0R1 490 aa20.04■□□□□ 0.8
HLCS-205ENST00000448340 UPF3AQ9H1J1 476 aaKnown RBP20.04■□□□□ 0.8
HLCS-205ENST00000448340 SYNRGQ9UMZ2 1314 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 STX6O43752 255 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 ADAMTS4O75173 837 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 TDP2O95551 362 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 GH1P01241 217 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 ARP10275 920 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 TRAPPC10P48553 1259 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 C9orf50Q5SZB4 431 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 ARRDC4Q8NCT1 418 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 OR6J1Q8NGC5 347 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 COPS5Q92905 334 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 EMID1Q96A84 441 aaPredicted RBP20.03■□□□□ 0.8
HLCS-205ENST00000448340 LENG9Q96B70 501 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 CDX2Q99626 313 aaPredicted RBP20.03■□□□□ 0.8
HLCS-205ENST00000448340 SEMA6BQ9H3T3 888 aa20.03■□□□□ 0.8
HLCS-205ENST00000448340 AGO4Q9HCK5 861 aaKnown RBP20.03■□□□□ 0.8
HLCS-205ENST00000448340 CCNT1O60563 726 aaKnown RBP20.02■□□□□ 0.8
HLCS-205ENST00000448340 ATP9AO75110 1047 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 GGPS1O95749 300 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 PGK1P00558 417 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 KCNA2P16389 499 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 ARHGAP1Q07960 439 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 LAMC2Q13753 1193 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 CELF3Q5SZQ8 465 aaKnown RBP20.02■□□□□ 0.8
HLCS-205ENST00000448340 ZNF697Q5TEC3 545 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 RNF180Q86T96 592 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 DHX37Q8IY37 1157 aaKnown RBP20.02■□□□□ 0.8
HLCS-205ENST00000448340 DDX25Q9UHL0 483 aaKnown RBP20.02■□□□□ 0.8
HLCS-205ENST00000448340 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.8
HLCS-205ENST00000448340 MTMR6Q9Y217 621 aa20.02■□□□□ 0.8
HLCS-205ENST00000448340 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
HLCS-205ENST00000448340 PTGS1P23219 599 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 CST5P28325 142 aaPredicted RBP20.01■□□□□ 0.79
HLCS-205ENST00000448340 MYSM1Q5VVJ2 828 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 KLHDC9Q8NEP7 349 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 MLXIPQ9HAP2 919 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 PRKAG2Q9UGJ0 569 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 ATP11BQ9Y2G3 1177 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 NFASCO94856 1347 aa20.01■□□□□ 0.79
HLCS-205ENST00000448340 PRUNE2Q8WUY3 3088 aa20■□□□□ 0.79
HLCS-205ENST00000448340 CTAGE5O15320 804 aa20■□□□□ 0.79
HLCS-205ENST00000448340 CPT1AP50416 773 aa20■□□□□ 0.79
HLCS-205ENST00000448340 LRRC41Q15345 812 aa20■□□□□ 0.79
HLCS-205ENST00000448340 FSCN1Q16658 493 aaKnown RBP20■□□□□ 0.79
HLCS-205ENST00000448340 BRDTQ58F21 947 aaPredicted RBP20■□□□□ 0.79
HLCS-205ENST00000448340 C1orf53Q5VUE5 145 aa20■□□□□ 0.79
HLCS-205ENST00000448340 METTL7BQ6UX53 244 aa20■□□□□ 0.79
HLCS-205ENST00000448340 CYFIP1Q7L576 1253 aa20■□□□□ 0.79
HLCS-205ENST00000448340 BRAPQ7Z569 592 aa20■□□□□ 0.79
HLCS-205ENST00000448340 ZNF577Q9BSK1 485 aa20■□□□□ 0.79
HLCS-205ENST00000448340 TTYH1Q9H313 450 aaPredicted RBP20■□□□□ 0.79
HLCS-205ENST00000448340 LTBP2Q14767 1821 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TRIM43BA6NCK2 446 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 A6NJR5 290 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 IPO5O00410 1097 aaKnown RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 MSH4O15457 936 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 ITGB3BPQ13352 177 aaPredicted RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 ORC2Q13416 577 aaPredicted RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 TRIM60Q495X7 471 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 RILPL1Q5EBL4 403 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 GNASQ5JWF2 1037 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 CCSAPQ6IQ19 270 aaPredicted RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 SH3RF1Q7Z6J0 888 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 PCSK9Q8NBP7 692 aaKnown RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 BADQ92934 168 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TRIM43Q96BQ3 446 aaPredicted RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 SDF4Q9BRK5 362 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
HLCS-205ENST00000448340 PDLIM7Q9NR12 457 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TBC1D22BQ9NU19 505 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
HLCS-205ENST00000448340 TTC28Q96AY4 2481 aa19.98■□□□□ 0.79
HLCS-205ENST00000448340 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms