RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SPATA31C2B4DYI2 1134 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 MAFGO15525 162 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 INHAP05111 366 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 TGFB3P10600 412 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 CYBAP13498 195 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 ATP2B1P20020 1258 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 ICAM3P32942 547 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 TRAPPC10P48553 1259 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 NUCB2P80303 420 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 CCDC144BQ3MJ40 725 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 SLC9C1Q4G0N8 1177 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 Q4G0T1 1027 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 PRR16Q569H4 304 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 FOXD4L5Q5VV16 416 aaPredicted RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 IQSEC1Q6DN90 963 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 MOXD1Q6UVY6 613 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 SEPT14Q6ZU15 432 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 NLRX1Q86UT6 975 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 FBXO16Q8IX29 292 aaPredicted RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 FOXD4L4Q8WXT5 416 aaPredicted RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 MBOAT7Q96N66 472 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 NAP1L4Q99733 375 aaKnown RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 WDR11Q9BZH6 1224 aa8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 NOL7Q9UMY1 257 aaKnown RBP8.57□□□□□ -1.04
AC004540.1-206ENST00000448056 HTTP42858 3142 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 WNT7AO00755 349 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 TDP2O95551 362 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 F13A1P00488 732 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 ARP10275 920 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 GCFC2P16383 781 aaKnown RBP8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 CCND3P30281 292 aaPredicted RBP8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 SP2Q02086 613 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 SEMA3FQ13275 785 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 MTMR1Q13613 665 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 HIC1Q14526 733 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF174Q15697 407 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 GNPTABQ3T906 1256 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 TTC38Q5R3I4 469 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 FAM173BQ6P4H8 233 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 CCDC62Q6P9F0 684 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 PLA2G4DQ86XP0 818 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 SCFD2Q8WU76 684 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 LENG9Q96B70 501 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 GPRASP2Q96D09 838 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 CDHR1Q96JP9 859 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 KCNH7Q9NS40 1196 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 DDX25Q9UHL0 483 aaKnown RBP8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 PCDHB6Q9Y5E3 794 aa8.56□□□□□ -1.04
AC004540.1-206ENST00000448056 CENPFP49454 3210 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 LCTP09848 1927 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 MSH4O15457 936 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 SEPT4O43236 478 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 FIBPO43427 364 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 SLC37A4O43826 429 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 ATP9AO75110 1047 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 ARIH2O95376 493 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 TXNP10599 105 aaKnown RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 SMPD1P17405 629 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 CNGA1P29973 690 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 MCM7P33993 719 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 ADCYAP1R1P41586 468 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 SETQ01105 290 aaPredicted RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 TNFAIP2Q03169 654 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 ORC2Q13416 577 aaPredicted RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 TTLL4Q14679 1199 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 LY6KQ17RY6 165 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 DUSP28Q4G0W2 176 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 TMEM63BQ5T3F8 832 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 ARMC5Q96C12 935 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 SENP7Q9BQF6 1050 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 MCOLN1Q9GZU1 580 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 AGO4Q9HCK5 861 aaKnown RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 MRVI1Q9Y6F6 885 aa8.55□□□□□ -1.04
AC004540.1-206ENST00000448056 IPO5O00410 1097 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 TBX3O15119 743 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 DHX15O43143 795 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ADCY6O43306 1168 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 NEMFO60524 1076 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 MYCP01106 439 aaPredicted RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 CCL5P13501 91 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 AKR1A1P14550 325 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 KCNA2P16389 499 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 COL9A1P20849 921 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms