RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CCDC82Q8N4S0 544 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 CERS4Q9HA82 394 aa20.97■□□□□ 0.95
COL9A1-205ENST00000447041 H3BRB1 525 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 NOP56O00567 594 aaKnown RBP20.96■□□□□ 0.95
COL9A1-205ENST00000447041 KCNJ6P48051 423 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 NEDD9Q14511 834 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 MBTPS1Q14703 1052 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 GPR20Q99678 358 aa20.96■□□□□ 0.95
COL9A1-205ENST00000447041 TUT1Q9H6E5 874 aaKnown RBP20.96■□□□□ 0.95
COL9A1-205ENST00000447041 RFXAPO00287 272 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 PARNO95453 639 aaKnown RBP20.95■□□□□ 0.94
COL9A1-205ENST00000447041 SMIM10L2AP0DMW4 78 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 SMIM10L2BP0DMW5 78 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 DEFB103AP81534 67 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 UBE2SQ16763 222 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 SERINC5Q86VE9 423 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 SGMS1Q86VZ5 419 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 TRIM50Q86XT4 487 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 FANCBQ8NB91 859 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 COL4A4P53420 1690 aaPredicted RBP20.95■□□□□ 0.94
COL9A1-205ENST00000447041 MYO9BQ13459 2157 aa20.95■□□□□ 0.94
COL9A1-205ENST00000447041 REV3LO60673 3130 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 C17orf102A2RUQ5 167 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 EPOPA6NHQ4 379 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 HOXC8P31273 242 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 SP4Q02446 784 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 TAP1Q03518 808 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 SPRED2Q7Z698 418 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 MICALL1Q8N3F8 863 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 PSTPIP2Q9H939 334 aa20.94■□□□□ 0.94
COL9A1-205ENST00000447041 TLL1O43897 1013 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 THPOP40225 353 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 RNF20Q5VTR2 975 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 XRRA1Q6P2D8 792 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 APOA5Q6Q788 366 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 HEATR3Q7Z4Q2 680 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 ATP6V0A1Q93050 837 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 NEK1Q96PY6 1258 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 RNPEPQ9H4A4 650 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 CNTNAP5Q8WYK1 1306 aa20.93■□□□□ 0.94
COL9A1-205ENST00000447041 LCHNA4D1U4 455 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 KIF28PB7ZC32 967 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 TREHO43280 583 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 ADCK5Q3MIX3 580 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 TJAP1Q5JTD0 557 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 UTP14CQ5TAP6 766 aaKnown RBP20.92■□□□□ 0.94
COL9A1-205ENST00000447041 NLRX1Q86UT6 975 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 RASEFQ8IZ41 740 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 SENP7Q9BQF6 1050 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 THEGQ9P2T0 379 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 XIRP2A4UGR9 3374 aa20.92■□□□□ 0.94
COL9A1-205ENST00000447041 ATP9AO75110 1047 aa20.91■□□□□ 0.94
COL9A1-205ENST00000447041 ARNTL2Q8WYA1 636 aa20.91■□□□□ 0.94
COL9A1-205ENST00000447041 GPRASP2Q96D09 838 aa20.91■□□□□ 0.94
COL9A1-205ENST00000447041 BRPF3Q9ULD4 1205 aa20.91■□□□□ 0.94
COL9A1-205ENST00000447041 MICAL3Q7RTP6 2002 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 ABHD14A-ACY1A0A1B0GW23 586 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 RSPH10B2B2RC85 870 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 CDC45O75419 566 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 LGR5O75473 907 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 CTSHP09668 335 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 RSPH10BP0C881 870 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 KCNA2P16389 499 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 ITGB5P18084 799 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 EXOSC10Q01780 885 aaKnown RBP20.9■□□□□ 0.94
COL9A1-205ENST00000447041 WWC2Q6AWC2 1192 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 SYNE3Q6ZMZ3 975 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 SYMPKQ92797 1274 aaKnown RBP20.9■□□□□ 0.94
COL9A1-205ENST00000447041 SETD4Q9NVD3 440 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 PKD2L1Q9P0L9 805 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
COL9A1-205ENST00000447041 PCDHA6Q9UN73 950 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 PCDHA8Q9Y5H6 950 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 MTCH2Q9Y6C9 303 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 MUC3AQ02505 3323 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 TRANK1O15050 2925 aa20.9■□□□□ 0.94
COL9A1-205ENST00000447041 EMSYQ7Z589 1322 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 SPDYE3A6NKU9 549 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 IKBKEQ14164 716 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 KRT40Q6A162 431 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 TYW1BQ6NUM6 668 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.93
COL9A1-205ENST00000447041 DBF4BQ8NFT6 615 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 ZBED2Q9BTP6 218 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 OSBPL7Q9BZF2 842 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 RBM28Q9NW13 759 aaKnown RBP20.89■□□□□ 0.93
COL9A1-205ENST00000447041 UBIAD1Q9Y5Z9 338 aa20.89■□□□□ 0.93
COL9A1-205ENST00000447041 ZBTB43O43298 467 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 GJB5O95377 273 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 TCF7P36402 384 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-205ENST00000447041 MKRN4PQ13434 485 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-205ENST00000447041 MTMR1Q13613 665 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 RTN1Q16799 776 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 TSGA10IPQ3SY00 556 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 FAM117BQ6P1L5 589 aa20.88■□□□□ 0.93
COL9A1-205ENST00000447041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL9A1-205ENST00000447041 GIMAP8Q8ND71 665 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms