RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SGPL1O95470 568 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 KRT18P05783 430 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 JAG1P78504 1218 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 CEBPZQ03701 1054 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 RSPH3Q86UC2 560 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 REXO1Q8N1G1 1221 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 PHKBQ93100 1093 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 C8orf76Q96K31 380 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZNF215Q9UL58 517 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-208ENST00000442054 SPTLC2O15270 562 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZRANB2O95218 330 aaKnown RBP eCLIP8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 SKILP12757 684 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 FUT2Q10981 343 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 APOA5Q6Q788 366 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 GTPBP4Q9BZE4 634 aaKnown RBP8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 ZHX3Q9H4I2 956 aa8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 DDX20Q9UHI6 824 aaKnown RBP8.27□□□□□ -1.08
CDC42BPA-208ENST00000442054 FER1L6Q2WGJ9 1857 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 PXYLP1Q8TE99 480 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 SPATA33Q96N06 139 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 A1CFQ9NQ94 594 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 CASP8AP2Q9UKL3 1982 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 CSPG5O95196 566 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 NR3C2P08235 984 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 ATP1A3P13637 1013 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 CPT1AP50416 773 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 OAZ1P54368 228 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 NPY5RQ15761 445 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 LETM2Q2VYF4 491 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 SLC38A10Q9HBR0 1119 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 MORF4L1Q9UBU8 362 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 FOCADQ5VW36 1801 aa8.27□□□□□ -1.09
CDC42BPA-208ENST00000442054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 NFIBO00712 420 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 GH1P01241 217 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 FECHP22830 423 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 PBX1P40424 430 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 FBXO38Q6PIJ6 1188 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 SEPT4O43236 478 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 MARK3P27448 753 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 LIFRP42702 1097 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 GRIN1Q05586 938 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 FBXO2Q9UK22 296 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 NRXN2Q9P2S2 1712 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 FGRP09769 529 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 BEX3Q00994 111 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 CACNB2Q08289 660 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 NEDD9Q14511 834 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 CXCL17Q6UXB2 119 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 RNF169Q8NCN4 708 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 NOC3LQ8WTT2 800 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 TNFRSF25Q93038 417 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 MKL1Q969V6 931 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 SNED1Q8TER0 1413 aa8.26□□□□□ -1.09
CDC42BPA-208ENST00000442054 GGPS1O95749 300 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 GNAT1P11488 350 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 GSDMDP57764 484 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 CBX1P83916 185 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 UBE2SQ16763 222 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 TMEM266Q2M3C6 531 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 TLK2Q86UE8 772 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 VSTM4Q8IW00 320 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 TRIB2Q92519 343 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 VPS54Q9P1Q0 977 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 VWA3AA6NCI4 1184 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 SUPT20HL2P0C7V6 817 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 TAL1P17542 331 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 LONRF3Q496Y0 759 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 PRR16Q569H4 304 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 KRT40Q6A162 431 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 FAM117BQ6P1L5 589 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 CEP57L1Q8IYX8 460 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 CCDC155Q8N6L0 562 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 MAML3Q96JK9 1138 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 TAAR1Q96RJ0 339 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 RAB34Q9BZG1 259 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 FAM49AQ9H0Q0 323 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 IL17RBQ9NRM6 502 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 GOLGB1Q14789 3259 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 POLR2AP24928 1970 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 WDR90Q96KV7 1748 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 KINO60870 393 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 PLEKHA8P1O95397 391 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 DEXIO95424 95 aa8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 CCND3P30281 292 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-208ENST00000442054 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.091e-6■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms