RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 GOLGA6AQ9NYA3 693 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.5
SEMA3B-207ENST00000441915 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 BBOX1O75936 387 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 CFAP221Q4G0U5 840 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 HYIQ5T013 277 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 GPATCH4Q5T3I0 446 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 C8orf74Q6P047 294 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 FOXR1Q6PIV2 292 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 GJA10Q969M2 543 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 RASSF4Q9H2L5 321 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 PSTPIP2Q9H939 334 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 RNF14Q9UBS8 474 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.58e-7■■□□□ 11.8
SEMA3B-207ENST00000441915 ZBTB5O15062 677 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 POLR2FP61218 127 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 GTF2IP78347 998 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 EMBQ6PCB8 327 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 C10orf67Q8IYJ2 551 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 NAP1L4Q99733 375 aaKnown RBP18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 SMARCAL1Q9NZC9 954 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 EHD2Q9NZN4 543 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
SEMA3B-207ENST00000441915 NOL4O94818 638 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 GLE1Q53GS7 698 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 HAUS3Q68CZ6 603 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 LSM14BQ9BX40 385 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 KIAA1024Q9UPX6 916 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 E9PMD0 336 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 MRPS25P82663 173 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 NELFCDQ8IXH7 590 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 YY1AP1Q9H869 796 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
SEMA3B-207ENST00000441915 FOCADQ5VW36 1801 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 TLR2O60603 784 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 PPFIA4O75335 1185 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 SLC16A2P36021 539 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 MARSP56192 900 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 HERC4Q5GLZ8 1057 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 EPS15P42566 896 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 TRIM59Q8IWR1 403 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 RBM12Q9NTZ6 932 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 MYH7BA7E2Y1 1941 aa18.18■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L10C9JJH3 530 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 TRIM66O15016 1216 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 OPA1O60313 960 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 CHRM1P11229 460 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 TNFRSF8P28908 595 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 SLC18A3Q16572 532 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 RUFY1Q96T51 708 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 FGFBP2Q9BYJ0 223 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 EMILIN3Q9NT22 766 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 GOLGA8KD6RF30 607 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 F8W031 263 aaPredicted RBP18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 SERPINB2P05120 415 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 GPBP1Q86WP2 473 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 GLT8D2Q9H1C3 349 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 MYO3BQ8WXR4 1341 aa18.17■□□□□ 0.5
SEMA3B-207ENST00000441915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 PALMO75781 387 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 ADRA2BP18089 450 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 ADAM9Q13443 819 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 NAB2Q15742 525 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 TMC4Q7Z404 712 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 MS4A14Q96JA4 679 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 POTECB2RU33 542 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 SHOX2O60902 331 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 KRT18P05783 430 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 ALS2CLQ60I27 953 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 SCFD1Q8WVM8 642 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 CAVIN3Q969G5 261 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 KANSL2Q9H9L4 492 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
SEMA3B-207ENST00000441915 KLRC1P26715 233 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 ARID5AQ03989 594 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 KLHL30Q0D2K2 578 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 IFT20Q8IY31 132 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 KCTD10Q9H3F6 313 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms