RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FIGNQ5HY92 759 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 TMEM132EQ6IEE7 984 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 PKN3Q6P5Z2 889 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 ANKLE2Q86XL3 938 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 CHST14Q8NCH0 376 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 FBXO15Q8NCQ5 510 aaPredicted RBP6.97□□□□□ -1.29
PFDN4-202ENST00000441080 SH3RF2Q8TEC5 729 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 CHAC2Q8WUX2 184 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 CABP5Q9NP86 173 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 ASH2LQ9UBL3 628 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 SRPK3Q9UPE1 567 aa6.97□□□□□ -1.29
PFDN4-202ENST00000441080 MAN2B1O00754 1011 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 KCNK3O14649 394 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 SOX5P35711 763 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 TUSC3Q13454 348 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 PCBP1Q15365 356 aaKnown RBP eCLIP6.96□□□□□ -1.3
PFDN4-202ENST00000441080 KCTD1Q719H9 257 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 RNF180Q86T96 592 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 TRIM48Q8IWZ4 208 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 RBM12BQ8IXT5 1001 aaKnown RBP6.96□□□□□ -1.3
PFDN4-202ENST00000441080 NLGN4XQ8N0W4 816 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 LEO1Q8WVC0 666 aaPredicted RBP6.96□□□□□ -1.3
PFDN4-202ENST00000441080 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 MTFR1LQ9H019 292 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 CAAP1Q9H8G2 361 aa6.96□□□□□ -1.3
PFDN4-202ENST00000441080 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 TRAF5O00463 557 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 SEMA7AO75326 666 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 LTFP02788 710 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 PMLP29590 882 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 CNGA1P29973 690 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 MECP2P51608 486 aaKnown RBP6.95□□□□□ -1.3
PFDN4-202ENST00000441080 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
PFDN4-202ENST00000441080 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 KRT26Q7Z3Y9 468 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.95□□□□□ -1.3
PFDN4-202ENST00000441080 AMIGO3Q86WK7 504 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 ARRDC4Q8NCT1 418 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 IFT57Q9NWB7 429 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
PFDN4-202ENST00000441080 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 ATP23Q9Y6H3 246 aa6.95□□□□□ -1.3
PFDN4-202ENST00000441080 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 ASGR2P07307 311 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
PFDN4-202ENST00000441080 SEPT7Q16181 437 aaKnown RBP6.94□□□□□ -1.3
PFDN4-202ENST00000441080 ARHGAP44Q17R89 818 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 ETV3LQ6ZN32 361 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 LDHDQ86WU2 507 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 MIB1Q86YT6 1006 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 FAM126BQ8IXS8 530 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 UBR7Q8N806 425 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 CLEC4DQ8WXI8 215 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 ORAI3Q9BRQ5 295 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 B4GALT6Q9UBX8 382 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 ZKSCAN5Q9Y2L8 839 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 TELO2Q9Y4R8 837 aa6.94□□□□□ -1.3
PFDN4-202ENST00000441080 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 GAS7O60861 476 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 KRT37O76014 449 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 NCAM1P13591 858 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 FBLN1P23142 703 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 CDR1P51861 262 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 EPHA5P54756 1037 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 IRF9Q00978 393 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 GRIN1Q05586 938 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 TARBP2Q15633 366 aaKnown RBP6.93□□□□□ -1.3
PFDN4-202ENST00000441080 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
PFDN4-202ENST00000441080 KIF18BQ86Y91 864 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 OR2W6PQ8NHA6 318 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 TTLL11Q8NHH1 800 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 SGPP1Q9BX95 441 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 RNF38Q9H0F5 515 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
PFDN4-202ENST00000441080 DTLQ9NZJ0 730 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 RNF114Q9Y508 228 aa6.93□□□□□ -1.3
PFDN4-202ENST00000441080 ZNF891A8MT65 544 aaPredicted RBP6.92□□□□□ -1.3
PFDN4-202ENST00000441080 SCDO00767 359 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
PFDN4-202ENST00000441080 HIP1RO75146 1068 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 F2P00734 622 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 PFKLP17858 780 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 PTPN1P18031 435 aaKnown RBP6.92□□□□□ -1.3
PFDN4-202ENST00000441080 GJA4P35212 333 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 STAT5AP42229 794 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 SCNN1BP51168 640 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 NCKAP1LP55160 1127 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 SART3Q15020 963 aaKnown RBP6.92□□□□□ -1.3
PFDN4-202ENST00000441080 BTBD8Q5XKL5 378 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 CPZQ66K79 652 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 FSTL4Q6MZW2 842 aa6.92□□□□□ -1.3
PFDN4-202ENST00000441080 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms