RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SLC39A14Q15043 492 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 TMEM266Q2M3C6 531 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 CELF3Q5SZQ8 465 aaKnown RBP20.78■□□□□ 0.92
HDAC6-208ENST00000438518 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
HDAC6-208ENST00000438518 SMAP1Q8IYB5 467 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-208ENST00000438518 C4orf32Q8N8J7 132 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 KCNG4Q8TDN1 519 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 HAS1Q92839 578 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 ZNF333Q96JL9 665 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.78■□□□□ 0.92
HDAC6-208ENST00000438518 MLXIPQ9HAP2 919 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 SPC25Q9HBM1 224 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 JPH1Q9HDC5 661 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-208ENST00000438518 PCDHA12Q9UN75 941 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
HDAC6-208ENST00000438518 ATP9AO75110 1047 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 FARP2O94887 1054 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 GGPS1O95749 300 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 CCND3P30281 292 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 SFNP31947 248 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 NKX3-2P78367 333 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 ITGB3BPQ13352 177 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 STK38Q15208 465 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 PTPAQ15257 358 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 BRDTQ58F21 947 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 ZNF746Q6NUN9 644 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 DTHD1Q6ZMT9 781 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 LINC00301Q8NCQ3 95 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 RDM1Q8NG50 284 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 FERMT2Q96AC1 680 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 TMEM60Q9H2L4 133 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 PAK6Q9NQU5 681 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-208ENST00000438518 SLC9A2Q9UBY0 812 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 STK24Q9Y6E0 443 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
HDAC6-208ENST00000438518 TCHHQ07283 1943 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.76■□□□□ 0.91
HDAC6-208ENST00000438518 DHX15O43143 795 aaKnown RBP20.76■□□□□ 0.91
HDAC6-208ENST00000438518 FXR2P51116 673 aaKnown RBP eCLIP20.76■□□□□ 0.91
HDAC6-208ENST00000438518 SP2Q02086 613 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 ARHGAP1Q07960 439 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 PPP2R5CQ13362 524 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 TLK2Q86UE8 772 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 MCOLN1Q9GZU1 580 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 AP5M1Q9H0R1 490 aa20.76■□□□□ 0.91
HDAC6-208ENST00000438518 TTC12Q9H892 705 aaPredicted RBP20.76■□□□□ 0.91
HDAC6-208ENST00000438518 TXKP42681 527 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 CPT1AP50416 773 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 GJA9P57773 515 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 PDIA5Q14554 519 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 B3GNT9Q6UX72 402 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 CYFIP1Q7L576 1253 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 OR6J1Q8NGC5 347 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 PPTC7Q8NI37 304 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 TNPO1Q92973 898 aaKnown RBP20.75■□□□□ 0.91
HDAC6-208ENST00000438518 UPF3AQ9H1J1 476 aaKnown RBP20.75■□□□□ 0.91
HDAC6-208ENST00000438518 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 ELP1O95163 1332 aa20.75■□□□□ 0.91
HDAC6-208ENST00000438518 WDR64B1ANS9 1081 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 SPTLC2O15270 562 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 ADCY6O43306 1168 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 CCL5P13501 91 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 NCLP19338 710 aaKnown RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 JAK3P52333 1124 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 CEBPZQ03701 1054 aaKnown RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 CLEC17AQ6ZS10 378 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 AK8Q96MA6 479 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 FTOQ9C0B1 505 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 XPNPEP3Q9NQH7 507 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 PKD2L1Q9P0L9 805 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
HDAC6-208ENST00000438518 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
HDAC6-208ENST00000438518 A6NJR5 290 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 CST5P28325 142 aaPredicted RBP20.73■□□□□ 0.91
HDAC6-208ENST00000438518 LONP1P36776 959 aaKnown RBP20.73■□□□□ 0.91
HDAC6-208ENST00000438518 NEK9Q8TD19 979 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 SEPT1Q8WYJ6 367 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 SPATA32Q96LK8 384 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 SPATA33Q96N06 139 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 RNF208Q9H0X6 261 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 UNC93B1Q9H1C4 597 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 SYNRGQ9UMZ2 1314 aa20.73■□□□□ 0.91
HDAC6-208ENST00000438518 DYNC1LI2O43237 492 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-208ENST00000438518 ZEB2O60315 1214 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 KPNA6O60684 536 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 ATG7O95352 703 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 HOXD8P13378 290 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-208ENST00000438518 SPIRE1Q08AE8 756 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 LHX8Q68G74 356 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 MIS18BP1Q6P0N0 1132 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 RNF180Q86T96 592 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
HDAC6-208ENST00000438518 KRI1Q8N9T8 703 aaKnown RBP20.72■□□□□ 0.91
HDAC6-208ENST00000438518 COPS5Q92905 334 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms