RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PRDM12Q9H4Q4 367 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SENP2Q9HC62 589 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PCDHA1Q9Y5I3 950 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SLC4A7Q9Y6M7 1214 aa10.93□□□□□ -0.66
CDC42-IT1-201ENST00000431803 IFIT3O14879 490 aaKnown RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 F2P00734 622 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 IQCF3P0C7M6 154 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 HOXD8P13378 290 aaPredicted RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ATP2A2P16615 1042 aaKnown RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ANTXR2P58335 489 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RBL2Q08999 1139 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ADGRE1Q14246 886 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 DGKDQ16760 1214 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RALYLQ86SE5 291 aaKnown RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 IL31RAQ8NI17 732 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MAP4K1Q92918 833 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PIGSQ96S52 555 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GAS2L1Q99501 681 aaPredicted RBP10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 NKX2-4Q9H2Z4 354 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PCDHA11Q9Y5I1 949 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
CDC42-IT1-201ENST00000431803 FRMPD4Q14CM0 1322 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PNMA6FA0A0J9YX94 578 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ERICH2A1L162 156 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 HAS3O00219 553 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 HOXA13P31271 388 aaPredicted RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RABGGTBP53611 331 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TRAF1Q13077 416 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 BFSP2Q13515 415 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 LAMC2Q13753 1193 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 WTAPQ15007 396 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SART3Q15020 963 aaKnown RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PGM5Q15124 567 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PTGISQ16647 500 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GDF6Q6KF10 455 aaPredicted RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CHST3Q7LGC8 479 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 HOMER1Q86YM7 354 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 IGDCC4Q8TDY8 1250 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 AFAP1L1Q8TED9 768 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 NOD1Q9Y239 953 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MYO9BQ13459 2157 aa10.91□□□□□ -0.66
CDC42-IT1-201ENST00000431803 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TET1Q8NFU7 2136 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 POLR2MP0CAP2 368 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ZNF286BP0CG31 522 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 ACTN1P12814 892 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MYOGP15173 224 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 GPNMBQ14956 572 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 TMEM67Q5HYA8 995 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MYSM1Q5VVJ2 828 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 KCNV1Q6PIU1 500 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 SLC9A7Q96T83 725 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 MAP3K14Q99558 947 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 KATNAL1Q9BW62 490 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 RBM8AQ9Y5S9 174 aaKnown RBP10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 BDP1A6H8Y1 2624 aa10.9□□□□□ -0.66
CDC42-IT1-201ENST00000431803 PPFIA4O75335 1185 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 DDAH1O94760 285 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 BAIAP3O94812 1187 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TGFB3P10600 412 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MYCLP12524 364 aaPredicted RBP10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SELPP16109 830 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 UBA1P22314 1058 aaKnown RBP10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CCND2P30279 289 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CHMP4BP1P59074 171 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SP2Q02086 613 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 HSDL1Q3SXM5 330 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LRRC8DQ7L1W4 858 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 C7orf31Q8N865 590 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PHOSPHO2Q8TCD6 241 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SPZ1Q9BXG8 430 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LY9Q9HBG7 655 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 HDAC6Q9UBN7 1215 aa10.89□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 GGPS1O95749 300 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CXCL10P02778 98 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CA3P07451 260 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CKBP12277 381 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms