RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 PCDHA8Q9Y5H6 950 aa13.61□□□□□ -0.23
TRERNA1-201ENST00000431460 SMCO2A6NFE2 343 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 FIBPO43427 364 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 FDPSP14324 419 aaKnown RBP13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 PSEN2P49810 448 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 ADCY7P51828 1080 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 SEMA3FQ13275 785 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 MFSD10Q14728 455 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 CYFIP1Q7L576 1253 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 DEFB123Q8N688 67 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 KAT2BQ92831 832 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 INPP4AQ96PE3 977 aaPredicted RBP13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 SEZ6LQ9BYH1 1024 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
TRERNA1-201ENST00000431460 SPATA31C2B4DYI2 1134 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 JAK2O60674 1132 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 STAM2O75886 525 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 SUPT20HL2P0C7V6 817 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 TGFB3P10600 412 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 GNA11P29992 359 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 PTGISQ16647 500 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 KIAA0753Q2KHM9 967 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
TRERNA1-201ENST00000431460 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 F2P00734 622 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 XBP1P17861 261 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 ICAM3P32942 547 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 NEDD9Q14511 834 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 UTP14CQ5TAP6 766 aaKnown RBP13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 MCTP2Q6DN12 878 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 GALNT17Q6IS24 598 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 PSRC1Q6PGN9 363 aaPredicted RBP13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 TRIM50Q86XT4 487 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 IL23AQ9NPF7 189 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
TRERNA1-201ENST00000431460 DOCK5Q9H7D0 1870 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 MYH7BA7E2Y1 1941 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 DTNBO60941 627 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 FOSP01100 380 aaPredicted RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 LGALS2P05162 132 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 ITGB5P18084 799 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 CLK2P49760 499 aaKnown RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 NLRP5P59047 1200 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 PTPN11Q06124 597 aaPredicted RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 MTMR1Q13613 665 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 CUL4AQ13619 759 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 XRRA1Q6P2D8 792 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
TRERNA1-201ENST00000431460 GRXCR1A8MXD5 290 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ADAMTS3O15072 1205 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ATP9AO75110 1047 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ZNF200P98182 395 aaPredicted RBP13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ZNF697Q5TEC3 545 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 RETREG2Q8NC44 543 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 DAGLBQ8NCG7 672 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 UIMC1Q96RL1 719 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 GPR20Q99678 358 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 PHF20Q9BVI0 1012 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 PCDHA4Q9UN74 947 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
TRERNA1-201ENST00000431460 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 H3BRB1 525 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 HAS3O00219 553 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 FGBP02675 491 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 HOXD8P13378 290 aaPredicted RBP13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 KCNA2P16389 499 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 ZNF76P36508 570 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 BFSP2Q13515 415 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 NPY5RQ15761 445 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms