RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 TUT1Q9H6E5 874 aaKnown RBP16.06■□□□□ 0.16
SEC13-211ENST00000431352 REV3LO60673 3130 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
SEC13-211ENST00000431352 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 PRC1O43663 620 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 LPXNO60711 386 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 EFCAB14O75071 495 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 RXRAP19793 462 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 POU3F3P20264 500 aaPredicted RBP16.05■□□□□ 0.16
SEC13-211ENST00000431352 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 AAK1Q2M2I8 961 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
SEC13-211ENST00000431352 USP17L6PQ6QN14 398 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 CASC1Q6TDU7 716 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.05■□□□□ 0.162e-23■■■■■ 54.1
SEC13-211ENST00000431352 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 MYOCDQ8IZQ8 938 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 CMTR1Q8N1G2 835 aaKnown RBP16.05■□□□□ 0.16
SEC13-211ENST00000431352 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 CUL5Q93034 780 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
SEC13-211ENST00000431352 RAD9AQ99638 391 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 SEC63Q9UGP8 760 aaKnown RBP16.05■□□□□ 0.16
SEC13-211ENST00000431352 TELO2Q9Y4R8 837 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
SEC13-211ENST00000431352 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 LINC01553A4QN01 128 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 TREHO43280 583 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 FIBPO43427 364 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 DDAH1O94760 285 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 BMP1P13497 986 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 KIF5BP33176 963 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 DBF4BQ8NFT6 615 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 MAP4K1Q92918 833 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
SEC13-211ENST00000431352 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 SPATA31C2B4DYI2 1134 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 AMHP03971 560 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 COL9A1P20849 921 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 NEDD9Q14511 834 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 HLA-CQ95604 372 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
SEC13-211ENST00000431352 GPR20Q99678 358 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 RAPGEFL1Q9UHV5 662 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
SEC13-211ENST00000431352 NCOR1O75376 2440 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 STAM2O75886 525 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 ICAM3P32942 547 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 ARHGAP4P98171 946 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
SEC13-211ENST00000431352 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 USP26Q9BXU7 913 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 OSBPL7Q9BZF2 842 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 ZNF215Q9UL58 517 aaPredicted RBP16.02■□□□□ 0.16
SEC13-211ENST00000431352 COG5Q9UP83 839 aa16.02■□□□□ 0.16
SEC13-211ENST00000431352 XIRP2A4UGR9 3374 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 SH2B2O14492 632 aaPredicted RBP16.01■□□□□ 0.15
SEC13-211ENST00000431352 MEIS2O14770 477 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 HOXC8P31273 242 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 MCM5P33992 734 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 ERVK-21P61565 698 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 UBE2SQ16763 222 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
SEC13-211ENST00000431352 SEPT8Q92599 483 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 C17orf80Q9BSJ5 609 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
SEC13-211ENST00000431352 SLC27A2O14975 620 aa16■□□□□ 0.15
SEC13-211ENST00000431352 UPP2O95045 317 aa16■□□□□ 0.15
SEC13-211ENST00000431352 GNAT1P11488 350 aa16■□□□□ 0.15
SEC13-211ENST00000431352 MARK3P27448 753 aa16■□□□□ 0.15
SEC13-211ENST00000431352 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
SEC13-211ENST00000431352 NLRX1Q86UT6 975 aa16■□□□□ 0.15
SEC13-211ENST00000431352 FBXO22Q8NEZ5 403 aa16■□□□□ 0.15
SEC13-211ENST00000431352 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
SEC13-211ENST00000431352 YME1L1Q96TA2 773 aa16■□□□□ 0.15
SEC13-211ENST00000431352 MAP3K14Q99558 947 aa16■□□□□ 0.15
SEC13-211ENST00000431352 LZTS2Q9BRK4 669 aa16■□□□□ 0.15
SEC13-211ENST00000431352 LSG1Q9H089 658 aaKnown RBP16■□□□□ 0.15
SEC13-211ENST00000431352 INSL6Q9Y581 213 aa16■□□□□ 0.15
SEC13-211ENST00000431352 MICAL3Q7RTP6 2002 aa16■□□□□ 0.15
SEC13-211ENST00000431352 SIP14410 1827 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 GNAQP50148 359 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
SEC13-211ENST00000431352 MICU3Q86XE3 530 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
SEC13-211ENST00000431352 CAND2O75155 1236 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms