RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 EMID1Q96A84 441 aaPredicted RBP17.14■□□□□ 0.33
VARS2-203ENST00000428017 LENG9Q96B70 501 aa17.14■□□□□ 0.33
VARS2-203ENST00000428017 FAM20AQ96MK3 541 aa17.14■□□□□ 0.33
VARS2-203ENST00000428017 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
VARS2-203ENST00000428017 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
VARS2-203ENST00000428017 JPH1Q9HDC5 661 aaPredicted RBP17.14■□□□□ 0.33
VARS2-203ENST00000428017 NFASCO94856 1347 aa17.14■□□□□ 0.33
VARS2-203ENST00000428017 DDX39AO00148 427 aaKnown RBP17.13■□□□□ 0.33
VARS2-203ENST00000428017 TBX3O15119 743 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
VARS2-203ENST00000428017 F13A1P00488 732 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 NUCB2P80303 420 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 GNASQ5JWF2 1037 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
VARS2-203ENST00000428017 AFG1LQ8WV93 481 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 RIT2Q99578 217 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 OGDHLQ9ULD0 1010 aa17.13■□□□□ 0.33
VARS2-203ENST00000428017 ADAMTS4O75173 837 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 PTGS1P23219 599 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
VARS2-203ENST00000428017 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
VARS2-203ENST00000428017 PKP1Q13835 747 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 NBR1Q14596 966 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 LRRC41Q15345 812 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 PPTC7Q8NI37 304 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 IPO9Q96P70 1041 aaKnown RBP17.12■□□□□ 0.33
VARS2-203ENST00000428017 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
VARS2-203ENST00000428017 MCM3APO60318 1980 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 A6NJR5 290 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 DNM1LO00429 736 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 WNT7AO00755 349 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 KPNA6O60684 536 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 BRD1O95696 1058 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 BMP15O95972 392 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 BEX3Q00994 111 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 KRT76Q01546 638 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 DGKDQ16760 1214 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
VARS2-203ENST00000428017 ATP6V1DQ9Y5K8 247 aa17.11■□□□□ 0.33
VARS2-203ENST00000428017 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 LAD1O00515 517 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 CHMP2AO43633 222 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 MMP3P08254 477 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 MYL3P08590 195 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
VARS2-203ENST00000428017 TXKP42681 527 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 KCNA10Q16322 511 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 KLHDC9Q8NEP7 349 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 SEPT1Q8WYJ6 367 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
VARS2-203ENST00000428017 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 SAMM50Q9Y512 469 aa17.1■□□□□ 0.33
VARS2-203ENST00000428017 POTEFA5A3E0 1075 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 DHX15O43143 795 aaKnown RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 PSMD10O75832 226 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 ACTR2P61160 394 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 NKX3-2P78367 333 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 PTGDRQ13258 359 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 TMEM266Q2M3C6 531 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 ZNF746Q6NUN9 644 aaPredicted RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 SMAP1Q8IYB5 467 aaPredicted RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 HAS1Q92839 578 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 GJA10Q969M2 543 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 VTI1AQ96AJ9 217 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 GPR20Q99678 358 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
VARS2-203ENST00000428017 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 ELP1O95163 1332 aa17.09■□□□□ 0.33
VARS2-203ENST00000428017 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 CTAGE5O15320 804 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 ASGR1P07306 291 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 EN2P19622 333 aaPredicted RBP17.08■□□□□ 0.32
VARS2-203ENST00000428017 SFNP31947 248 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.32
VARS2-203ENST00000428017 JAK3P52333 1124 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 SOX10P56693 466 aa17.08■□□□□ 0.32
VARS2-203ENST00000428017 IRX5P78411 483 aaPredicted RBP17.08■□□□□ 0.32
VARS2-203ENST00000428017 CEBPZQ03701 1054 aaKnown RBP17.08■□□□□ 0.32
VARS2-203ENST00000428017 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms