RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TNFRSF10AO00220 468 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
GACAT3-201ENST00000426539 TLL1O43897 1013 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
GACAT3-201ENST00000426539 ICAM3P32942 547 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 TFF2Q03403 129 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 GRB10Q13322 594 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 CATIPQ7Z7H3 387 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 SERINC5Q86VE9 423 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 ZNF654Q8IZM8 581 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 ADAMTS19Q8TE59 1207 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 INPP4AQ96PE3 977 aaPredicted RBP11.62□□□□□ -0.55
GACAT3-201ENST00000426539 OSBPL7Q9BZF2 842 aa11.62□□□□□ -0.55
GACAT3-201ENST00000426539 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
GACAT3-201ENST00000426539 MYH6P13533 1939 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 MEIS2O14770 477 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 DDAH1O94760 285 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 LGALS2P05162 132 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 SMIM10L2AP0DMW4 78 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 SMIM10L2BP0DMW5 78 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 BMP1P13497 986 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 KCNJ6P48051 423 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 TRAF1Q13077 416 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 SART3Q15020 963 aaKnown RBP11.61□□□□□ -0.55
GACAT3-201ENST00000426539 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.61□□□□□ -0.55
GACAT3-201ENST00000426539 SRBD1Q8N5C6 995 aaKnown RBP11.61□□□□□ -0.55
GACAT3-201ENST00000426539 NECAB3Q96P71 396 aaPredicted RBP11.61□□□□□ -0.55
GACAT3-201ENST00000426539 MAP3K14Q99558 947 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 GPR20Q99678 358 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
GACAT3-201ENST00000426539 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 TRIP12Q14669 1992 aaPredicted RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 C17orf102A2RUQ5 167 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 H3BRB1 525 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 SH2B2O14492 632 aaPredicted RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 TREHO43280 583 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 PRC1O43663 620 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 LGR5O75473 907 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 GJB5O95377 273 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 KCNQ1P51787 676 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 METTL7BQ6UX53 244 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 TRIM50Q86XT4 487 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 RNPEPQ9H4A4 650 aa11.6□□□□□ -0.55
GACAT3-201ENST00000426539 TUT1Q9H6E5 874 aaKnown RBP11.6□□□□□ -0.55
GACAT3-201ENST00000426539 PRRC2BQ5JSZ5 2229 aaKnown RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 LINC01553A4QN01 128 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RSPH10B2B2RC85 870 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 PIK3CDO00329 1044 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 SLC27A2O14975 620 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 FIBPO43427 364 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 STAM2O75886 525 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RSPH10BP0C881 870 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RXRAP19793 462 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 THPOP40225 353 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 IKBKEQ14164 716 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 GNPTABQ3T906 1256 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 DBF4BQ8NFT6 615 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 CTCFLQ8NI51 663 aaPredicted RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 ATP6V0A1Q93050 837 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 UHRF1Q96T88 793 aaPredicted RBP11.59□□□□□ -0.55
GACAT3-201ENST00000426539 RAD9AQ99638 391 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 MTA3Q9BTC8 594 aa11.59□□□□□ -0.55
GACAT3-201ENST00000426539 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 NOP56O00567 594 aaKnown RBP11.58□□□□□ -0.56
GACAT3-201ENST00000426539 ATP9AO75110 1047 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 KIF5BP33176 963 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 ERVK-21P61565 698 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 ADAM17P78536 824 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 NEDD9Q14511 834 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
GACAT3-201ENST00000426539 PLEKHG4Q58EX7 1191 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 ESYT1Q9BSJ8 1104 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 USP26Q9BXU7 913 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 SUGCTQ9HAC7 445 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
GACAT3-201ENST00000426539 MUC3AQ02505 3323 aa11.57□□□□□ -0.56
GACAT3-201ENST00000426539 MYH7BA7E2Y1 1941 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms