RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
CDK3-201ENST00000425876 LOC285556D6RIA3 1793 aa16.1■□□□□ 0.17
CDK3-201ENST00000425876 IPO5O00410 1097 aaKnown RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 IRF6O14896 467 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 ARP10275 920 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 STX17P56962 302 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 GSDMDP57764 484 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 SPAG1Q07617 926 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 PGM5Q15124 567 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 SLC30A10Q6XR72 485 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 LBX2Q6XYB7 198 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 IL31RAQ8NI17 732 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 CTAGE1Q96RT6 745 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 PDCD2LQ9BRP1 358 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 ACAD9Q9H845 621 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 COL11A1P12107 1806 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 E9PMD0 336 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 EML1O00423 815 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 PTGS1P23219 599 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 MRPS9P82933 396 aaKnown RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 STK4Q13043 487 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 BAATQ14032 418 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 EPHA7Q15375 998 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 TREML2Q5T2D2 321 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 LDLRAD1Q5T700 205 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 NEK9Q8TD19 979 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 NOC3LQ8WTT2 800 aaKnown RBP16.09■□□□□ 0.17
CDK3-201ENST00000425876 KCNH7Q9NS40 1196 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
CDK3-201ENST00000425876 BICDL2A1A5D9 508 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 HSPA6P17066 643 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 CYP11B2P19099 503 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 CCNE1P24864 410 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 CLCN1P35523 988 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 POTEGQ6S5H5 508 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 POTEEQ6S8J3 1075 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 CLMNQ96JQ2 1002 aa16.08■□□□□ 0.16
CDK3-201ENST00000425876 A0A1B0GTH6 734 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 MAFGO15525 162 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 EYA4O95677 639 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 CCND2P30279 289 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 DYMQ7RTS9 669 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 VSIG10LQ86VR7 867 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 GUF1Q8N442 669 aaKnown RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 NSUN6Q8TEA1 469 aaKnown RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 NAP1L5Q96NT1 182 aaPredicted RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 UNC45AQ9H3U1 944 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 AGO4Q9HCK5 861 aaKnown RBP16.07■□□□□ 0.16
CDK3-201ENST00000425876 TBC1D22BQ9NU19 505 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 CYP39A1Q9NYL5 469 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 AGTPBP1Q9UPW5 1226 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 A0A0G2JMZ2 1700 aa16.07■□□□□ 0.16
CDK3-201ENST00000425876 FRMD3A2A2Y4 597 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 DHX15O43143 795 aaKnown RBP16.06■□□□□ 0.16
CDK3-201ENST00000425876 STAM2O75886 525 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 SLITRK3O94933 977 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 FCER1AP12319 257 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 MTMR1Q13613 665 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 TTI2Q6NXR4 508 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 MOB2Q70IA6 237 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 FASTKD5Q7L8L6 764 aaKnown RBP16.06■□□□□ 0.16
CDK3-201ENST00000425876 RIOX2Q8IUF8 465 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 SMC1BQ8NDV3 1235 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 P2RX5Q93086 422 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 ZNF830Q96NB3 372 aaPredicted RBP16.06■□□□□ 0.16
CDK3-201ENST00000425876 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
CDK3-201ENST00000425876 LIMA1Q9UHB6 759 aaKnown RBP16.06■□□□□ 0.16
CDK3-201ENST00000425876 MAPK8IP1Q9UQF2 711 aa16.06■□□□□ 0.16
CDK3-201ENST00000425876 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDK3-201ENST00000425876 NR3C2P08235 984 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 IDEP14735 1019 aa16.05■□□□□ 0.16
CDK3-201ENST00000425876 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms