RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 CNNM2Q9H8M5 875 aa18.74■□□□□ 0.59
PUDP-203ENST00000424830 ZSWIM5Q9P217 1185 aa18.74■□□□□ 0.59
PUDP-203ENST00000424830 NLRC5Q86WI3 1866 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 H3BNC9 293 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 H3BQ06 376 aaPredicted RBP18.73■□□□□ 0.59
PUDP-203ENST00000424830 NOP56O00567 594 aaKnown RBP18.73■□□□□ 0.59
PUDP-203ENST00000424830 ZBTB5O15062 677 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 SP2Q02086 613 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 TRAF1Q13077 416 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 GPM6BQ13491 265 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 ERICH6BQ5W0A0 696 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 EP400NLQ6ZTU2 488 aa18.73■□□□□ 0.59
PUDP-203ENST00000424830 COL4A6Q14031 1691 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 RALGAPA2Q2PPJ7 1873 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 UPP2O95045 317 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 CTSHP09668 335 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 SMIM10L2AP0DMW4 78 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 SMIM10L2BP0DMW5 78 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 GNAT1P11488 350 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 RRP1P56182 461 aaKnown RBP18.72■□□□□ 0.59
PUDP-203ENST00000424830 STAG2Q8N3U4 1231 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 IL31RAQ8NI17 732 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 TOP1MTQ969P6 601 aa18.72■□□□□ 0.59
PUDP-203ENST00000424830 PABPC5Q96DU9 382 aaKnown RBP18.72■□□□□ 0.59
PUDP-203ENST00000424830 IFIH1Q9BYX4 1025 aaKnown RBP18.72■□□□□ 0.59
PUDP-203ENST00000424830 GCOM1H8Y6P7 765 aaPredicted RBP18.71■□□□□ 0.59
PUDP-203ENST00000424830 RBAK-RBAKDNI3L0D1 243 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 HIP1O00291 1037 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 TREHO43280 583 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 PPP1R11O60927 126 aaPredicted RBP18.71■□□□□ 0.59
PUDP-203ENST00000424830 LGALS2P05162 132 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 POLR2MP0CAP2 368 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 HOXC8P31273 242 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 GNPTABQ3T906 1256 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 TCEAL5Q5H9L2 206 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 TMEM192Q8IY95 271 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 APBB2Q92870 758 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 MTMR8Q96EF0 704 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 DSCC1Q9BVC3 393 aa18.71■□□□□ 0.59
PUDP-203ENST00000424830 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
PUDP-203ENST00000424830 DCXO43602 365 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 FCHSD1Q86WN1 690 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 HOMER1Q86YM7 354 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 USP26Q9BXU7 913 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 RNPEPQ9H4A4 650 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 PRKAG3Q9UGI9 489 aa18.7■□□□□ 0.58
PUDP-203ENST00000424830 ALYREFQ86V81 257 aaKnown RBP18.69■□□□□ 0.58
PUDP-203ENST00000424830 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
PUDP-203ENST00000424830 ZFP91Q96JP5 570 aaPredicted RBP18.69■□□□□ 0.58
PUDP-203ENST00000424830 CLDND1Q9NY35 253 aa18.69■□□□□ 0.58
PUDP-203ENST00000424830 MAD2L2Q9UI95 211 aa18.69■□□□□ 0.58
PUDP-203ENST00000424830 ZNF215Q9UL58 517 aaPredicted RBP18.69■□□□□ 0.58
PUDP-203ENST00000424830 WDFY4Q6ZS81 3184 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 C5orf42Q9H799 3197 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.68■□□□□ 0.58
PUDP-203ENST00000424830 NCK2O43639 380 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 NEDD9Q14511 834 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 COL19A1Q14993 1142 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 METTL7BQ6UX53 244 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 SETD4Q9NVD3 440 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 TRIOO75962 3097 aa18.68■□□□□ 0.58
PUDP-203ENST00000424830 MYO7AQ13402 2215 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 PALM3A6NDB9 673 aaPredicted RBP18.67■□□□□ 0.58
PUDP-203ENST00000424830 STAM2O75886 525 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 CTNNB1P35222 781 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 ZP2Q05996 745 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 PIGSQ96S52 555 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 RWDD3Q9Y3V2 267 aa18.67■□□□□ 0.58
PUDP-203ENST00000424830 KAT6AQ92794 2004 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 BAZ2BQ9UIF8 2168 aaKnown RBP18.66■□□□□ 0.58
PUDP-203ENST00000424830 ARHGAP4P98171 946 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 SEC23AQ15436 765 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 CYFIP1Q7L576 1253 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 ADHFE1Q8IWW8 467 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 C11orf84Q9BUA3 381 aaPredicted RBP18.66■□□□□ 0.58
PUDP-203ENST00000424830 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
PUDP-203ENST00000424830 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
PUDP-203ENST00000424830 POTEB3A0JP26 581 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 FIBPO43427 364 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 RB1P06400 928 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 ICAM3P32942 547 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 TRDNQ13061 729 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 GRM4Q14833 912 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 POTEBQ6S5H4 581 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 PLEKHM2Q8IWE5 1019 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
PUDP-203ENST00000424830 INPP4AQ96PE3 977 aaPredicted RBP18.65■□□□□ 0.58
PUDP-203ENST00000424830 POP1Q99575 1024 aaKnown RBP18.65■□□□□ 0.58
PUDP-203ENST00000424830 GPR20Q99678 358 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 LMAN2LQ9H0V9 348 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 KCNH6Q9H252 994 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 BCAS3Q9H6U6 928 aa18.65■□□□□ 0.58
PUDP-203ENST00000424830 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
PUDP-203ENST00000424830 NRCAMQ92823 1304 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms