RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 VAMP4O75379 141 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 FUCA1P04066 466 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 AMPD2Q01433 879 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 FAM50AQ14320 339 aaKnown RBP5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 ZNF326Q5BKZ1 582 aaKnown RBP5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 HEATR6Q6AI08 1181 aaKnown RBP5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 CD300LDQ6UXZ3 194 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 RUFY4Q6ZNE9 571 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 ARHGEF39Q8N4T4 335 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 ADCY4Q8NFM4 1077 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 PLEKHO2Q8TD55 490 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 ZNF747Q9BV97 191 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 KLC2Q9H0B6 622 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 PPP4R1LQ9P1A2 415 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 SIT1Q9Y3P8 196 aa5.35□□□□□ -1.55
SEMA3A-202ENST00000420047 REREQ9P2R6 1566 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 INO80Q9ULG1 1556 aaPredicted RBP5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 EHBP1L1Q8N3D4 1523 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 ITGA1P56199 1179 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 DPY19L1Q2PZI1 675 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 GNPTABQ3T906 1256 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 FBXW10Q5XX13 1052 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 ADAT2Q7Z6V5 191 aaKnown RBP5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 ZFPM1Q8IX07 1006 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 SEC14L1Q92503 715 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 PHAXQ9H814 394 aaKnown RBP5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 CD248Q9HCU0 757 aa5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 CGGBP1Q9UFW8 167 aaPredicted RBP5.34□□□□□ -1.55
SEMA3A-202ENST00000420047 ADGBQ8N7X0 1667 aa5.34□□□□□ -1.56
SEMA3A-202ENST00000420047 ABCC5O15440 1437 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 NCOA1Q15788 1441 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 NPEPPSL1A6NEC2 478 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 B4GALT3O60512 393 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 ICAM4Q14773 271 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 FAM26EQ8N5C1 309 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 DNERQ8NFT8 737 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 MMP19Q99542 508 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 VPS11Q9H270 941 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 LTBP4Q8N2S1 1624 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 PLXNC1O60486 1568 aa5.33□□□□□ -1.56
SEMA3A-202ENST00000420047 CCDC141Q6ZP82 1450 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 RTEL1-TNFRSF6BF6WH68 1400 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 PTPRTO14522 1441 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 TNRQ92752 1358 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 SGSM2O43147 1006 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 SLC6A11P48066 632 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 SLC7A5Q01650 507 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 KRTAP1-1Q07627 177 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 COL9A2Q14055 689 aaPredicted RBP5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 FAM126BQ8IXS8 530 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 SYT3Q9BQG1 590 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 PCED1AQ9H1Q7 454 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 PPT2Q9UMR5 302 aa5.32□□□□□ -1.56
SEMA3A-202ENST00000420047 MIA2Q96PC5 1412 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 CNTLNQ9NXG0 1405 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 EPHX1P07099 455 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 ZNF28P17035 718 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 EPHB4P54760 987 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 PPP2CBP62714 309 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 PPP2CAP67775 309 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 IDI1Q13907 227 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 PRAMEF18Q5VWM3 479 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 PKN3Q6P5Z2 889 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 STK32CQ86UX6 486 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 C19orf47Q8N9M1 422 aaKnown RBP5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 DPF3Q92784 378 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 COPS5Q92905 334 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 CRBNQ96SW2 442 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 DEF6Q9H4E7 631 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 NPATQ14207 1427 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 MYOM3Q5VTT5 1437 aa5.31□□□□□ -1.56
SEMA3A-202ENST00000420047 DNMT1P26358 1616 aaKnown RBP5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 DISP3Q9P2K9 1392 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 GPR42O15529 346 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 CYP7B1O75881 506 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 AMHP03971 560 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 CYP1A1P04798 512 aaPredicted RBP5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 HSPA1LP34931 641 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 NKX3-2P78367 333 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 CCDC27Q2M243 656 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 RIOX2Q8IUF8 465 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 THEMISQ8N1K5 641 aaPredicted RBP5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 TMEM87AQ8NBN3 555 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 MBD6Q96DN6 1003 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 FGD4Q96M96 766 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 BCL2L13Q9BXK5 485 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 TMEM168Q9H0V1 697 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 MARCH2Q9P0N8 246 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 CLEC1BQ9P126 229 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 TESMINQ9Y4I5 508 aa5.3□□□□□ -1.56
SEMA3A-202ENST00000420047 CEP170BQ9Y4F5 1589 aaPredicted RBP5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 A2ML1A8K2U0 1454 aa5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 C22orf46C9J442 243 aa5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 THBDP07204 575 aa5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 PLS3P13797 630 aa5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 IL13P35225 146 aa5.29□□□□□ -1.56
SEMA3A-202ENST00000420047 ZNF76P36508 570 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms