RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CYP3A7P24462 503 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 KRT2P35908 639 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 ATN1P54259 1190 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 NR5A1Q13285 461 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 ITGB3BPQ13352 177 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 NONOQ15233 471 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 BRDTQ58F21 947 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 EARS2Q5JPH6 523 aaKnown RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 ANKRD33Q7Z3H0 272 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 GIMAP8Q8ND71 665 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 FBXO18Q8NFZ0 1043 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 KAT2BQ92831 832 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 SNX21Q969T3 373 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 AGO4Q9HCK5 861 aaKnown RBP21.23■□□□□ 0.99
PTCD3-204ENST00000418628 TELO2Q9Y4R8 837 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 F2P00734 622 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 DGKDQ16760 1214 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 TRIM60Q495X7 471 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 CYFIP1Q7L576 1253 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 DIS3L2Q8IYB7 885 aaKnown RBP21.22■□□□□ 0.99
PTCD3-204ENST00000418628 SPATA33Q96N06 139 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 GPR20Q99678 358 aa21.22■□□□□ 0.99
PTCD3-204ENST00000418628 MTG1Q9BT17 334 aaPredicted RBP21.22■□□□□ 0.99
PTCD3-204ENST00000418628 FAM205CA6NFA0 338 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 HAS3O00219 553 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 DHX15O43143 795 aaKnown RBP21.21■□□□□ 0.99
PTCD3-204ENST00000418628 PPFIA4O75335 1185 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 MYL3P08590 195 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 INF2Q27J81 1249 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 PLA2G4DQ86XP0 818 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 C8orf76Q96K31 380 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 TOX2Q96NM4 488 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 SEZ6LQ9BYH1 1024 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 MLXIPQ9HAP2 919 aa21.21■□□□□ 0.99
PTCD3-204ENST00000418628 CCDC194A0A1B0GVG4 234 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 BTBD18B2RXH4 712 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 ARVCFO00192 962 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 Q4G0T1 1027 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 FAM126BQ8IXS8 530 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 C16orf70Q9BSU1 422 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 BRMS1Q9HCU9 246 aa21.2■□□□□ 0.98
PTCD3-204ENST00000418628 EVI5O60447 810 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 SORBS3O60504 671 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 TDP2O95551 362 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 ZNF286BP0CG31 522 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 ZNF76P36508 570 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 FOSBP53539 338 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 PSMC6P62333 389 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 ITGA7Q13683 1181 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 TRIM29Q14134 588 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 PIK3AP1Q6ZUJ8 805 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 JPH1Q9HDC5 661 aaPredicted RBP21.19■□□□□ 0.98
PTCD3-204ENST00000418628 MROH7Q68CQ1 1323 aa21.19■□□□□ 0.98
PTCD3-204ENST00000418628 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 K7ELQ4 463 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-204ENST00000418628 IPO5O00410 1097 aaKnown RBP21.18■□□□□ 0.98
PTCD3-204ENST00000418628 CD4P01730 458 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 LGALS2P05162 132 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 GJB2P29033 226 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 TLE2Q04725 743 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 PRR16Q569H4 304 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 PPP4R3AQ6IN85 833 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 SESTD1Q86VW0 696 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 C7orf61Q8IZ16 206 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 FAM184AQ8NB25 1140 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 TET1Q8NFU7 2136 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 DPF3Q92784 378 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 PDLIM7Q9NR12 457 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 PKD2L1Q9P0L9 805 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 SLC9A2Q9UBY0 812 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.18■□□□□ 0.98
PTCD3-204ENST00000418628 EMSYQ7Z589 1322 aa21.18■□□□□ 0.98
PTCD3-204ENST00000418628 MSH4O15457 936 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 GUCY1B3Q02153 619 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 ETNPPLQ8TBG4 499 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 SLC5A5Q92911 643 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 FOXP1Q9H334 677 aaPredicted RBP21.17■□□□□ 0.98
PTCD3-204ENST00000418628 ATP11BQ9Y2G3 1177 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 KIF3AQ9Y496 699 aa21.17■□□□□ 0.98
PTCD3-204ENST00000418628 KIF28PB7ZC32 967 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
PTCD3-204ENST00000418628 SLC37A4O43826 429 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 LGR5O75473 907 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 ATG7O95352 703 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 CCNE2O96020 404 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 GCFC2P16383 781 aaKnown RBP21.16■□□□□ 0.98
PTCD3-204ENST00000418628 U2AF2P26368 475 aaKnown RBP eCLIP21.16■□□□□ 0.98
PTCD3-204ENST00000418628 HOXC8P31273 242 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 PTPN11Q06124 597 aaPredicted RBP21.16■□□□□ 0.98
PTCD3-204ENST00000418628 FAAP100Q0VG06 881 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 NBPF20Q3BBV1 942 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 B3GNT9Q6UX72 402 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 INTS4Q96HW7 963 aaKnown RBP21.16■□□□□ 0.98
PTCD3-204ENST00000418628 SDF4Q9BRK5 362 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 KATNAL1Q9BW62 490 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 KCNMB3Q9NPA1 279 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 TBX21Q9UL17 535 aa21.16■□□□□ 0.98
PTCD3-204ENST00000418628 NR2E3Q9Y5X4 410 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms