RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MTMR2Q13614 643 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 ARSHQ5FYA8 562 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 DNTTIP2Q5QJE6 756 aaKnown RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 ANGEL2Q5VTE6 544 aaKnown RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 NCAPH2Q6IBW4 605 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 OTOP1Q7RTM1 612 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 GPBP1Q86WP2 473 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 CCDC65Q8IXS2 484 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 MB21D1Q8N884 522 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 ZNF280CQ8ND82 737 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 CYP2W1Q8TAV3 490 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 NEK9Q8TD19 979 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 IQCDQ96DY2 449 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 ERGIC2Q96RQ1 377 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 RIT2Q99578 217 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 BAG1Q99933 345 aaPredicted RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 HSD17B14Q9BPX1 270 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 EIF2AK1Q9BQI3 630 aaKnown RBP10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 SLC39A2Q9NP94 309 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 PANK4Q9NVE7 773 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 GGA3Q9NZ52 723 aa10.08□□□□□ -0.8
LINCMD1-201ENST00000418518 MYH9P35579 1960 aaKnown RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 DOCK5Q9H7D0 1870 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 GOLGA6L9A6NEM1 432 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 EML1O00423 815 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 NFIBO00712 420 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 COBLO75128 1261 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 RBL2Q08999 1139 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 GOLGA8FQ08AF8 430 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 GOLGA8DPQ0D2H9 430 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PTPN14Q15678 1187 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 BMT2Q1RMZ1 405 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 FIGNQ5HY92 759 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 SH3D19Q5HYK7 790 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 MIIPQ5JXC2 388 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PCNX4Q63HM2 1172 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 CEP135Q66GS9 1140 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PPFIBP1Q86W92 1011 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 WRNIP1Q96S55 665 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 MXRA8Q9BRK3 442 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 TTYH3Q9C0H2 523 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 VPS16Q9H269 839 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 RPAP3Q9H6T3 665 aaPredicted RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PICK1Q9NRD5 415 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 COL20A1Q9P218 1284 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 SCAF8Q9UPN6 1271 aaKnown RBP10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 PAXBP1Q9Y5B6 917 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 UBIAD1Q9Y5Z9 338 aa10.07□□□□□ -0.8
LINCMD1-201ENST00000418518 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 VWA5AO00534 786 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 DYNC1I1O14576 645 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 ZSCAN12O43309 604 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 ZBED4O75132 1171 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 FLOT1O75955 427 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 KIF20AO95235 890 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 UQCRHP07919 91 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 TPM1P09493 284 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 IDEP14735 1019 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 ADKP55263 362 aaKnown RBP10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 UBXN1Q04323 297 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 SPP2Q13103 211 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 GIT2Q14161 759 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 EPHA7Q15375 998 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 SUPT20HL1Q3ZLR7 823 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 XRRA1Q6P2D8 792 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 EPM2AIP1Q7L775 607 aaPredicted RBP10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 SYTL5Q8TDW5 730 aaPredicted RBP10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 HPS3Q969F9 1004 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 DNAJC7Q99615 494 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 TSG101Q99816 390 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 TANGO6Q9C0B7 1094 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 KCTD10Q9H3F6 313 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 KCND2Q9NZV8 630 aa10.06□□□□□ -0.8
LINCMD1-201ENST00000418518 A0A1W2PQJ5 194 aa10.05□□□□□ -0.8
LINCMD1-201ENST00000418518 IPO5O00410 1097 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms