RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SORBS3O60504 671 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RGS20O76081 388 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RB1P06400 928 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SP2Q02086 613 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 NHLH1Q02575 133 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GHRHRQ02643 423 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZP2Q05996 745 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TRAF1Q13077 416 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 APBB2Q92870 758 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 MFSD14AQ96MC6 490 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 FBXL18Q96ME1 805 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 POP1Q99575 1024 aaKnown RBP9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RNPEPQ9H4A4 650 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZSWIM5Q9P217 1185 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PCDHA1Q9Y5I3 950 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RALGAPA2Q2PPJ7 1873 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 B4E1Z4 1266 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 NOP56O00567 594 aaKnown RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TREHO43280 583 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SMIM10L2AP0DMW4 78 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SMIM10L2BP0DMW5 78 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 UBA1P22314 1058 aaKnown RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CCND2P30279 289 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HOXC8P31273 242 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PGM5Q15124 567 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RILPL2Q969X0 211 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 KRT23Q9C075 422 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LMAN2LQ9H0V9 348 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZNF318Q5VUA4 2279 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 KLRF2D3W0D1 207 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 C5orf67F2Z3F1 127 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GCOM1H8Y6P7 765 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 OPLAHO14841 1288 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZBTB5O15062 677 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LGALS2P05162 132 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CTSHP09668 335 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 POLR2MP0CAP2 368 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SDSP20132 328 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CTNNB1P35222 781 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IRS1P35568 1242 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 BMPR1AP36894 532 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 LTBRP36941 435 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 NEDD9Q14511 834 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SMAD2Q15796 467 aaKnown RBP9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GNPTABQ3T906 1256 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RPAINQ86UA6 219 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 UBAC1Q9BSL1 405 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CNNM2Q9H8M5 875 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SETD4Q9NVD3 440 aa9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZNF215Q9UL58 517 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 BAZ2BQ9UIF8 2168 aaKnown RBP9.12□□□□□ -0.95
HLA-DPA1-241ENST00000417724 COL4A6Q14031 1691 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 STAM2O75886 525 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IMMTQ16891 758 aaKnown RBP9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HERC4Q5GLZ8 1057 aaPredicted RBP9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 FAM26DQ5JW98 314 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IFIT1BQ5T764 474 aaKnown RBP9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 METTL7BQ6UX53 244 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HFE2Q6ZVN8 426 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 FCHSD1Q86WN1 690 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 STAG2Q8N3U4 1231 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 IL31RAQ8NI17 732 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 MTMR8Q96EF0 704 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 OSBPL7Q9BZF2 842 aa9.11□□□□□ -0.95
HLA-DPA1-241ENST00000417724 NRCAMQ92823 1304 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SPATA31C2B4DYI2 1134 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GRM6O15303 877 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 MBTPS2O43462 519 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PPP1R11O60927 126 aaPredicted RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ICAM3P32942 547 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ADAM17P78536 824 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HYAL1Q12794 435 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 SMAD4Q13485 552 aaKnown RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 HDAC1Q13547 482 aaPredicted RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CLUL1Q15846 466 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PKN1Q16512 942 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CWC27Q6UX04 472 aaKnown RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RSPH3Q86UC2 560 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 EDAQ92838 391 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 CLP1Q92989 425 aaKnown RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 PPP2R3CQ969Q6 453 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 INPP4AQ96PE3 977 aaPredicted RBP9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 GPR20Q99678 358 aa9.1□□□□□ -0.95
HLA-DPA1-241ENST00000417724 DSCC1Q9BVC3 393 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms