RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 UBA1P22314 1058 aaKnown RBP15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 SP2Q02086 613 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 GPM6BQ13491 265 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 PUS10Q3MIT2 529 aaKnown RBP15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 TCEAL5Q5H9L2 206 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 EP400NLQ6ZTU2 488 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 BANK1Q8NDB2 785 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 GPKOWQ92917 476 aaPredicted RBP eCLIP15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 ZFP91Q96JP5 570 aaPredicted RBP15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
CTHRC1-202ENST00000415886 COL4A6Q14031 1691 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 ERICH2A1L162 156 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 H3BNC9 293 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 CTSHP09668 335 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 GHRHRQ02643 423 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 PGM5Q15124 567 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 CSPP1Q1MSJ5 1256 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 RALYLQ86SE5 291 aaKnown RBP15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 TMEM192Q8IY95 271 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 ATP6V0A1Q93050 837 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 TOP1MTQ969P6 601 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 SAMD11Q96NU1 681 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 AMNQ9BXJ7 453 aa15.33■□□□□ 0.04
CTHRC1-202ENST00000415886 NLRC5Q86WI3 1866 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 SGSM2O43147 1006 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 TREHO43280 583 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 DCXO43602 365 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 SMIM10L2AP0DMW4 78 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 SMIM10L2BP0DMW5 78 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 HOXC8P31273 242 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 PTH1RQ03431 593 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 IFIT1BQ5T764 474 aaKnown RBP15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 KCNV1Q6PIU1 500 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 STOX1Q6ZVD7 989 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 SEPT8Q92599 483 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 PABPC5Q96DU9 382 aaKnown RBP15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 BCAS3Q9H6U6 928 aa15.32■□□□□ 0.04
CTHRC1-202ENST00000415886 H3BRB1 525 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 LGALS2P05162 132 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 ZP2Q05996 745 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 COL19A1Q14993 1142 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 VSIG10LQ86VR7 867 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 IL25Q9H293 177 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 NSUN3Q9H649 340 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 TUT1Q9H6E5 874 aaKnown RBP15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 CLDND1Q9NY35 253 aa15.31■□□□□ 0.04
CTHRC1-202ENST00000415886 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 CYP21A2P08686 494 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 MRE11P49959 708 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 RALGAPA2Q2PPJ7 1873 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 POTEBQ6S5H4 581 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 RPAINQ86UA6 219 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 MAP4K1Q92918 833 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 MTMR8Q96EF0 704 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
CTHRC1-202ENST00000415886 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 ZBTB5O15062 677 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 TGFB3P10600 412 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 CCND2P30279 289 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 NHLH1Q02575 133 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 FCHSD1Q86WN1 690 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 SETD4Q9NVD3 440 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 PRKAG3Q9UGI9 489 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
CTHRC1-202ENST00000415886 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 E7EWF7 191 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 CAND2O75155 1236 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 CTNNB1P35222 781 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 IRS1P35568 1242 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 LTBRP36941 435 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 CLUL1Q15846 466 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 HOMER1Q86YM7 354 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 ADHFE1Q8IWW8 467 aa15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
CTHRC1-202ENST00000415886 GCOM1H8Y6P7 765 aaPredicted RBP15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 CSPG5O95196 566 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 LINC00271P0C7V0 271 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 POLR2MP0CAP2 368 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 DLX2Q07687 328 aaPredicted RBP15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 HFE2Q6ZVN8 426 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms