RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 C11orf16Q9NQ32 467 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 KIAA1468Q9P260 1216 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 ADD3Q9UEY8 706 aaKnown RBP9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 COG5Q9UP83 839 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 HCN4Q9Y3Q4 1203 aa9.67□□□□□ -0.86
UPF3AP1-201ENST00000413731 DOCK5Q9H7D0 1870 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 MYO7AQ13402 2215 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 TLL1O43897 1013 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 RANBP6O60518 1105 aaKnown RBP9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 ARIH2O95376 493 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 EDNRBP24530 442 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 NOVP48745 357 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 WDR5P61964 334 aaKnown RBP9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 DEFB103AP81534 67 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 PHOSPHO2Q8TCD6 241 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 CTAGE1Q96RT6 745 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 FTOQ9C0B1 505 aaKnown RBP eCLIP9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 RALGAPA2Q2PPJ7 1873 aa9.66□□□□□ -0.86
UPF3AP1-201ENST00000413731 ZMYM6O95789 1325 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 LOC102724159A0A0B4J2E5 919 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 NKRFO15226 690 aaKnown RBP eCLIP9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 ORC4O43929 436 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 BAIAP3O94812 1187 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 KCNJ6P48051 423 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 CHMP4BP1P59074 171 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 RPS6P62753 249 aaKnown RBP9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 BFSP2Q13515 415 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 GPNMBQ14956 572 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 PWP2Q15269 919 aaKnown RBP9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 NR6A1Q15406 480 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 TCTN1Q2MV58 587 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 TMEM31Q5JXX7 168 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 ERICH6BQ5W0A0 696 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 BTNL9Q6UXG8 535 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 RNF207Q6ZRF8 634 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 SCFD2Q8WU76 684 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 RUFY2Q8WXA3 655 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 TMEM47Q9BQJ4 181 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 PPP4R2Q9NY27 417 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 MTUS1Q9ULD2 1270 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 PIEZO1Q92508 2521 aa9.65□□□□□ -0.86
UPF3AP1-201ENST00000413731 KIF28PB7ZC32 967 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 ATG7O95352 703 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 MMP3P08254 477 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 TXNP10599 105 aaKnown RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 PDHBP11177 359 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 HAND2P61296 217 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 PTGISQ16647 500 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 BRDTQ58F21 947 aaPredicted RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 RRP12Q5JTH9 1297 aaKnown RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 CD320Q9NPF0 282 aa9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 MAFBQ9Y5Q3 323 aaPredicted RBP9.64□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF318Q5VUA4 2279 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 WDR19Q8NEZ3 1342 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 NBNO60934 754 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 TOP1P11387 765 aaKnown RBP9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 CHMLP26374 656 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 FUT2Q10981 343 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 ALX1Q15699 326 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 USH1GQ495M9 461 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 BMP2KLQ5H9B9 411 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 LRRC8DQ7L1W4 858 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 CCDC155Q8N6L0 562 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 AFG1LQ8WV93 481 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 KAT2BQ92831 832 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 CPVLQ9H3G5 476 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 ANAPC4Q9UJX5 808 aa9.63□□□□□ -0.87
UPF3AP1-201ENST00000413731 LINC01553A4QN01 128 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 KPNA6O60684 536 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 FGAP02671 866 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 FGRP09769 529 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 SELPP16109 830 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 ARHGAP1Q07960 439 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 RBL2Q08999 1139 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF543Q08ER8 600 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 CNKSR3Q6P9H4 555 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 CASC1Q6TDU7 716 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 SND1Q7KZF4 910 aaKnown RBP eCLIP9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 WNT8BQ93098 351 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 DSCC1Q9BVC3 393 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 IL25Q9H293 177 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 UBE2ZQ9H832 354 aaPredicted RBP9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 SUGCTQ9HAC7 445 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
UPF3AP1-201ENST00000413731 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 BAZ2BQ9UIF8 2168 aaKnown RBP9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 KIAA1671Q9BY89 1806 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF213O14771 459 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms