RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 CATIPQ7Z7H3 387 aa21.55■■□□□ 1.04
ITGA6-204ENST00000412899 SUGCTQ9HAC7 445 aa21.55■■□□□ 1.04
ITGA6-204ENST00000412899 RBAK-RBAKDNI3L0D1 243 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 AMHP03971 560 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 LGALS2P05162 132 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.54■■□□□ 1.042e-6■■■□□ 18.5
ITGA6-204ENST00000412899 USP26Q9BXU7 913 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 BCAS3Q9H6U6 928 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 RTEL1Q9NZ71 1219 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 INSL6Q9Y581 213 aa21.54■■□□□ 1.04
ITGA6-204ENST00000412899 COL4A4P53420 1690 aaPredicted RBP21.53■■□□□ 1.04
ITGA6-204ENST00000412899 STAM2O75886 525 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 SMIM10L2AP0DMW4 78 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 SMIM10L2BP0DMW5 78 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 MRPS9P82933 396 aaKnown RBP21.53■■□□□ 1.04
ITGA6-204ENST00000412899 NEDD9Q14511 834 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 MYOCDQ8IZQ8 938 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 C1QTNF1Q9BXJ1 281 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 RNPEPQ9H4A4 650 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 PPP4R2Q9NY27 417 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 RAPGEFL1Q9UHV5 662 aa21.53■■□□□ 1.04
ITGA6-204ENST00000412899 TREHO43280 583 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 ICAM3P32942 547 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 CYFIP1Q7L576 1253 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 SMARCC2Q8TAQ2 1214 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 CUL5Q93034 780 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 INPP4AQ96PE3 977 aaPredicted RBP21.52■■□□□ 1.04
ITGA6-204ENST00000412899 TAF6LQ9Y6J9 622 aa21.52■■□□□ 1.04
ITGA6-204ENST00000412899 SPATA31C2B4DYI2 1134 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 FIBPO43427 364 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 GNAT1P11488 350 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 PLEKHG4Q58EX7 1191 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 METTL7BQ6UX53 244 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 CTCFLQ8NI51 663 aaPredicted RBP21.51■■□□□ 1.03
ITGA6-204ENST00000412899 FRMPD4Q14CM0 1322 aa21.51■■□□□ 1.03
ITGA6-204ENST00000412899 CTSHP09668 335 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 HOXC8P31273 242 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 FBXO22Q8NEZ5 403 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 IGDCC4Q8TDY8 1250 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 SEPT8Q92599 483 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 RRP36Q96EU6 259 aaKnown RBP21.5■■□□□ 1.03
ITGA6-204ENST00000412899 GPR20Q99678 358 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 C17orf80Q9BSJ5 609 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 ESYT1Q9BSJ8 1104 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 SETD4Q9NVD3 440 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 ZNF215Q9UL58 517 aaPredicted RBP21.5■■□□□ 1.03
ITGA6-204ENST00000412899 MUC3AQ02505 3323 aa21.5■■□□□ 1.03
ITGA6-204ENST00000412899 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
ITGA6-204ENST00000412899 CAND2O75155 1236 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 KIF5BP33176 963 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 ANTXR2P58335 489 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 SP4Q02446 784 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 UTP14CQ5TAP6 766 aaKnown RBP21.49■■□□□ 1.03
ITGA6-204ENST00000412899 USP17L6PQ6QN14 398 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 MAP4K1Q92918 833 aa21.49■■□□□ 1.03
ITGA6-204ENST00000412899 SEC63Q9UGP8 760 aaKnown RBP21.49■■□□□ 1.03
ITGA6-204ENST00000412899 HTRA4P83105 476 aaPredicted RBP21.48■■□□□ 1.03
ITGA6-204ENST00000412899 SEMA3FQ13275 785 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 MKRN4PQ13434 485 aaPredicted RBP21.48■■□□□ 1.03
ITGA6-204ENST00000412899 PCNX4Q63HM2 1172 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 NLRX1Q86UT6 975 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 TRIM50Q86XT4 487 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
ITGA6-204ENST00000412899 ZNF654Q8IZM8 581 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 YME1L1Q96TA2 773 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 MYL10Q9BUA6 226 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 SPZ1Q9BXG8 430 aa21.48■■□□□ 1.03
ITGA6-204ENST00000412899 DDAH1O94760 285 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 UPP2O95045 317 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 ARHGAP4P98171 946 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 XRRA1Q6P2D8 792 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 MAP3K14Q99558 947 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 EPHX3Q9H6B9 360 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 UBE2ZQ9H832 354 aaPredicted RBP21.47■■□□□ 1.03
ITGA6-204ENST00000412899 SIP14410 1827 aa21.47■■□□□ 1.03
ITGA6-204ENST00000412899 SMARCA1P28370 1054 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 NFXL1Q6ZNB6 911 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 GIMAP8Q8ND71 665 aaPredicted RBP21.46■■□□□ 1.03
ITGA6-204ENST00000412899 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
ITGA6-204ENST00000412899 TOP1MTQ969P6 601 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 SAMD11Q96NU1 681 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 SENP7Q9BQF6 1050 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 OSBPL7Q9BZF2 842 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 LY9Q9HBG7 655 aa21.46■■□□□ 1.03
ITGA6-204ENST00000412899 RBM8AQ9Y5S9 174 aaKnown RBP21.46■■□□□ 1.03
ITGA6-204ENST00000412899 MICAL3Q7RTP6 2002 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 PIK3CDO00329 1044 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 MEIS2O14770 477 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 CDC45O75419 566 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 GNAQP50148 359 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 PTPROQ16827 1216 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 EPC2Q52LR7 807 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 LMBR1Q8WVP7 490 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 APBB2Q92870 758 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 LSG1Q9H089 658 aaKnown RBP21.45■■□□□ 1.02
ITGA6-204ENST00000412899 ANO2Q9NQ90 1003 aa21.45■■□□□ 1.02
ITGA6-204ENST00000412899 TELO2Q9Y4R8 837 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms