RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 PPFIA4O75335 1185 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 CLK2P49760 499 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 APBA1Q02410 837 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 FAM182BQ5T319 152 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 TTBK2Q6IQ55 1244 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 ADGRF4Q8IZF3 695 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 UIMC1Q96RL1 719 aa16.74■□□□□ 0.27
LYSMD4-204ENST00000409796 IGKV6D-41A0A0C4DH26 115 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 SLC9C1Q4G0N8 1177 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 SFMBT2Q5VUG0 894 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 SLF2Q8IX21 1173 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 NELFCDQ8IXH7 590 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 TSEN2Q8NCE0 465 aaKnown RBP16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 DAGLAQ9Y4D2 1042 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 MARCH6O60337 910 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 SHOX2O60902 331 aaPredicted RBP16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 EPHB4P54760 987 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 POLR2FP61218 127 aaKnown RBP16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 GABPAQ06546 454 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 E9PMD0 336 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 SERPING1P05155 500 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
LYSMD4-204ENST00000409796 NPHP3-ACAD11A0A0J9YXS1 232 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 SLC16A2P36021 539 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 MAGEA9P43362 315 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 SEPT2Q15019 361 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 SH3GL2Q99962 352 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 GUCY2CP25092 1073 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 SYN2Q92777 582 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 CUL5Q93034 780 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 CEP63Q96MT8 703 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 NUCKS1Q9H1E3 243 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 ATP6V0A2Q9Y487 856 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 PCDHA2Q9Y5H9 948 aa16.72■□□□□ 0.27
LYSMD4-204ENST00000409796 ANKRD65E5RJM6 399 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 PALMO75781 387 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 DNA2P51530 1060 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 EMBQ6PCB8 327 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 TBC1D22AQ8WUA7 517 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 TBC1D5Q92609 795 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 KIAA1024Q9UPX6 916 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 MYH4Q9Y623 1939 aa16.71■□□□□ 0.27
LYSMD4-204ENST00000409796 TTLL1O95922 423 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 FTCDO95954 541 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 TNFRSF8P28908 595 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 SKIDA1Q1XH10 827 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 HYIQ5T013 277 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM196AQ6ZSG2 479 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 TSKSQ9UJT2 592 aa16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.26
LYSMD4-204ENST00000409796 LOC102724159A0A0B4J2E5 919 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 GOLGA8KD6RF30 607 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 PLA2G4BP0C869 781 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 KLRC1P26715 233 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 IRAK1P51617 712 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 ARID5AQ03989 594 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 RAPGEF1Q13905 1077 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 PWP2Q15269 919 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 NAB2Q15742 525 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEB3A0JP26 581 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 POTECB2RU33 542 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 GTF2IP78347 998 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 ENOX2Q16206 610 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 POTEBQ6S5H4 581 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 CCDC65Q8IXS2 484 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 ARL8AQ96BM9 186 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 NT5C3AQ9H0P0 336 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
LYSMD4-204ENST00000409796 KDM3AQ9Y4C1 1321 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms