RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 C4orf32Q8N8J7 132 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 RDM1Q8NG50 284 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 SH3TC2Q8TF17 1288 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 ARMC5Q96C12 935 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 AP5M1Q9H0R1 490 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 JPH1Q9HDC5 661 aaPredicted RBP18.8■□□□□ 0.6
IMP4-202ENST00000409649 TFIP11Q9UBB9 837 aaKnown RBP18.8■□□□□ 0.6
IMP4-202ENST00000409649 CLIC4Q9Y696 253 aa18.8■□□□□ 0.6
IMP4-202ENST00000409649 WNT7AO00755 349 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 SPTLC2O15270 562 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 PSMD10O75832 226 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 GGPS1O95749 300 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 SMPD1P17405 629 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 SFNP31947 248 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 TXKP42681 527 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 CEBPZQ03701 1054 aaKnown RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 PDIA5Q14554 519 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 PTPAQ15257 358 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 LY6KQ17RY6 165 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 FOXD4L6Q3SYB3 417 aaPredicted RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 ZNF746Q6NUN9 644 aaPredicted RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 FOXD4L3Q6VB84 417 aaPredicted RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 SMAP1Q8IYB5 467 aaPredicted RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 LINC00301Q8NCQ3 95 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 TRPV1Q8NER1 839 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 HAS1Q92839 578 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 TTC12Q9H892 705 aaPredicted RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 DDX20Q9UHI6 824 aaKnown RBP18.79■□□□□ 0.6
IMP4-202ENST00000409649 RCOR1Q9UKL0 485 aa18.79■□□□□ 0.6
IMP4-202ENST00000409649 NOP56O00567 594 aaKnown RBP18.78■□□□□ 0.6
IMP4-202ENST00000409649 ATP9AO75110 1047 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 FXR2P51116 673 aaKnown RBP eCLIP18.78■□□□□ 0.6
IMP4-202ENST00000409649 JAK3P52333 1124 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 TRIM32Q13049 653 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 ITGB3BPQ13352 177 aaPredicted RBP18.78■□□□□ 0.6
IMP4-202ENST00000409649 PPP2R5CQ13362 524 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 SPATA32Q96LK8 384 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 AK8Q96MA6 479 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 GBP4Q96PP9 640 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.78■□□□□ 0.64e-11■■■■■ 38.2
IMP4-202ENST00000409649 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
IMP4-202ENST00000409649 GNEQ9Y223 722 aaKnown RBP18.78■□□□□ 0.6
IMP4-202ENST00000409649 WDR64B1ANS9 1081 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 DHX15O43143 795 aaKnown RBP18.77■□□□□ 0.6
IMP4-202ENST00000409649 FARP2O94887 1054 aaPredicted RBP18.77■□□□□ 0.6
IMP4-202ENST00000409649 ARIH2O95376 493 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 CCND3P30281 292 aaPredicted RBP18.77■□□□□ 0.6
IMP4-202ENST00000409649 CPT1AP50416 773 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 SP2Q02086 613 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 CLEC17AQ6ZS10 378 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 CYFIP1Q7L576 1253 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 TLK2Q86UE8 772 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 KRI1Q8N9T8 703 aaKnown RBP18.77■□□□□ 0.6
IMP4-202ENST00000409649 OR6J1Q8NGC5 347 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 PPTC7Q8NI37 304 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 ERMNQ8TAM6 284 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 ZNF333Q96JL9 665 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
IMP4-202ENST00000409649 SRPRBQ9Y5M8 271 aaKnown RBP18.77■□□□□ 0.6
IMP4-202ENST00000409649 ELP1O95163 1332 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 MCM3APO60318 1980 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.76■□□□□ 0.59
IMP4-202ENST00000409649 ZEB2O60315 1214 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 KPNA6O60684 536 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
IMP4-202ENST00000409649 NKX3-2P78367 333 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 ARHGAP1Q07960 439 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 SEPT1Q8WYJ6 367 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 SPATA33Q96N06 139 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 FTOQ9C0B1 505 aaKnown RBP eCLIP18.76■□□□□ 0.59
IMP4-202ENST00000409649 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
IMP4-202ENST00000409649 DYNC1LI2O43237 492 aaPredicted RBP18.75■□□□□ 0.59
IMP4-202ENST00000409649 SLC26A4O43511 780 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 DKC1O60832 514 aaKnown RBP eCLIP18.75■□□□□ 0.59
IMP4-202ENST00000409649 PPFIA4O75335 1185 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 CCL5P13501 91 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 TECP42680 631 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 GJA9P57773 515 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 MIS18BP1Q6P0N0 1132 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
IMP4-202ENST00000409649 ARRDC4Q8NCT1 418 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 NEK9Q8TD19 979 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 LEO1Q8WVC0 666 aaPredicted RBP18.75■□□□□ 0.59
IMP4-202ENST00000409649 MCOLN1Q9GZU1 580 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 RNF208Q9H0X6 261 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 UPF3AQ9H1J1 476 aaKnown RBP18.75■□□□□ 0.59
IMP4-202ENST00000409649 PAK6Q9NQU5 681 aaPredicted RBP18.75■□□□□ 0.59
IMP4-202ENST00000409649 VAV3Q9UKW4 847 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 PCDHA10Q9Y5I2 948 aa18.75■□□□□ 0.59
IMP4-202ENST00000409649 VWA3AA6NCI4 1184 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 A6NJR5 290 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 CUTAO60888 179 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 PSAPP07602 524 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 ME1P48163 572 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 ACTR2P61160 394 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 HAUS3Q68CZ6 603 aa18.74■□□□□ 0.59
IMP4-202ENST00000409649 B3GNT9Q6UX72 402 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms