RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GPRC5AQ8NFJ5 357 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 EIF2AK1Q9BQI3 630 aaKnown RBP12.58□□□□□ -0.4
SNX13-202ENST00000409604 PARP2Q9UGN5 583 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 FBXO40Q9UH90 709 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 TMOD1P28289 359 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 AP3B2Q13367 1082 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 UVSSAQ2YD98 709 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 GJC2Q5T442 439 aaPredicted RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 PADI6Q6TGC4 694 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 EMILIN3Q9NT22 766 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 USP20Q9Y2K6 914 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 XRCC5P13010 732 aaKnown RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 ZNF75DP51815 510 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 TFAMQ00059 246 aaKnown RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 ZBTB8OSQ8IWT0 167 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 PSAPP07602 524 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 CETPP11597 493 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 TNNT3P45378 269 aaPredicted RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 ZNF445P59923 1031 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 HERVK_113P62684 666 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 LMBRD2Q68DH5 695 aaPredicted RBP12.57□□□□□ -0.4
SNX13-202ENST00000409604 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
SNX13-202ENST00000409604 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 ABCB4P21439 1286 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 GSDMDP57764 484 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 KIFC3Q9BVG8 833 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX13-202ENST00000409604 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 NMT1P30419 496 aaKnown RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 NXF1Q9UBU9 619 aaKnown RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 WDR64B1ANS9 1081 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 K7ERI5 159 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 ZNF394Q53GI3 561 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 FAM117BQ6P1L5 589 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 TAF1DQ9H5J8 278 aaPredicted RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 ZBTB39O15060 712 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 PRELPP51888 382 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 SOX10P56693 466 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 HTRA3P83110 453 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
SNX13-202ENST00000409604 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 PARVGQ9HBI0 331 aa12.56□□□□□ -0.4
SNX13-202ENST00000409604 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 MYBP10242 640 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 TMED8Q6PL24 325 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 FMR1NBQ8N0W7 255 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 PPP1R9BQ96SB3 815 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 BAG1Q99933 345 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 AKR1B15C9JRZ8 316 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX13-202ENST00000409604 TTLL4Q14679 1199 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 MTA3Q9BTC8 594 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 QARSP47897 775 aaKnown RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 PPARDQ03181 441 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 TREML2Q5T2D2 321 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 CYP4F22Q6NT55 531 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
SNX13-202ENST00000409604 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.55□□□□□ -0.4
SNX13-202ENST00000409604 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
SNX13-202ENST00000409604 ABL1P00519 1130 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 CTNNA2P26232 953 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 CASQ1P31415 396 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 ATP2C1P98194 919 aaPredicted RBP12.54□□□□□ -0.4
SNX13-202ENST00000409604 ZNF354CQ86Y25 554 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 AK8Q96MA6 479 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
SNX13-202ENST00000409604 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 ZNF302Q9NR11 478 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
SNX13-202ENST00000409604 NEBLO76041 1014 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms