RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 ZNF165P49910 485 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 ACVR2BQ13705 512 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 PTPAQ15257 358 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 ZNF174Q15697 407 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 TTC38Q5R3I4 469 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 SEPT14Q6ZU15 432 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 TIGD1Q96MW7 591 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 INPP4AQ96PE3 977 aaPredicted RBP15.14■□□□□ 0.01
LIMS1-204ENST00000409441 NAP1L4Q99733 375 aaKnown RBP15.14■□□□□ 0.01
LIMS1-204ENST00000409441 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 JADE2Q9NQC1 790 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 PRDM10Q9NQV6 1147 aa15.14■□□□□ 0.01
LIMS1-204ENST00000409441 LCTP09848 1927 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 GOLGA6L6A8MZA4 724 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 CUTAO60888 179 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 GRK4P32298 578 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 NDUFA8P51970 172 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 TRIM32Q13049 653 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 PRR16Q569H4 304 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 MOXD1Q6UVY6 613 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 FBXO16Q8IX29 292 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-204ENST00000409441 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 KATNBL1Q9H079 304 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 VTA1Q9NP79 307 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 PDGFCQ9NRA1 345 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 DDX25Q9UHL0 483 aaKnown RBP15.13■□□□□ 0.01
LIMS1-204ENST00000409441 PCDHB6Q9Y5E3 794 aa15.13■□□□□ 0.01
LIMS1-204ENST00000409441 MORC2Q9Y6X9 1032 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-204ENST00000409441 IGLV3-22A0A075B6J6 115 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 A0A1B0GVL5 298 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 SPATA31C2B4DYI2 1134 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 HMGCRP04035 888 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 ARP10275 920 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 GCFC2P16383 781 aaKnown RBP15.12■□□□□ 0.01
LIMS1-204ENST00000409441 MCM7P33993 719 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-204ENST00000409441 MTMR1Q13613 665 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
LIMS1-204ENST00000409441 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 Q4G0T1 1027 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 TAPT1Q6NXT6 567 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 NIPA1Q7RTP0 329 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-204ENST00000409441 LUZP1Q86V48 1076 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 SDF4Q9BRK5 362 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
LIMS1-204ENST00000409441 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-204ENST00000409441 MAFGO15525 162 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 AP5Z1O43299 807 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 SLC37A4O43826 429 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 ZNF865P0CJ78 1059 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-204ENST00000409441 LENG9Q96B70 501 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 GPRASP2Q96D09 838 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 NAT10Q9H0A0 1025 aaKnown RBP15.11■□□□□ 0.01
LIMS1-204ENST00000409441 NRBP1Q9UHY1 535 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 HPSEQ9Y251 543 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIMS1-204ENST00000409441 PLXNA1Q9UIW2 1896 aa15.11■□□□□ 0.01
LIMS1-204ENST00000409441 GOLGA6L19H0YKK7 550 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ZNF202O95125 648 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 TGFB3P10600 412 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 PFKFB1P16118 471 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ICAM3P32942 547 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 IQCB1Q15051 598 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 KCNV1Q6PIU1 500 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 FBXO46Q6PJ61 603 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 TRPV1Q8NER1 839 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SH3TC2Q8TF17 1288 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 CDHR1Q96JP9 859 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 UIMC1Q96RL1 719 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 KIAA1468Q9P260 1216 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 CEP131Q9UPN4 1083 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 RBM47A0AV96 593 aaKnown RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 MSH4O15457 936 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ATP9AO75110 1047 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 INHAP05111 366 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ADCYAP1R1P41586 468 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SETQ01105 290 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SEMA3FQ13275 785 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ORC2Q13416 577 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 RESP18Q5W5W9 173 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SARM1Q6SZW1 724 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 ELOA2Q8IYF1 753 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 CEP57L1Q8IYX8 460 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 BPIFA3Q9BQP9 254 aa15.1■□□□□ 0.01
LIMS1-204ENST00000409441 AGO4Q9HCK5 861 aaKnown RBP15.1■□□□□ 0.01
LIMS1-204ENST00000409441 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms