RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 ATP6V0A1Q93050 837 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 PABPC5Q96DU9 382 aaKnown RBP15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 CRBNQ96SW2 442 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 AMNQ9BXJ7 453 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 RNPEPQ9H4A4 650 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 TECTAO75443 2155 aa15.24■□□□□ 0.03
TUBA3D-202ENST00000409047 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 H3BRB1 525 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 LGALS2P05162 132 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 TGFB3P10600 412 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 SSTR3P32745 418 aaPredicted RBP15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 SEMA3FQ13275 785 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 GPM6BQ13491 265 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 PUS10Q3MIT2 529 aaKnown RBP15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 TMEM192Q8IY95 271 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 IL25Q9H293 177 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 TUT1Q9H6E5 874 aaKnown RBP15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 MAP3K20Q9NYL2 800 aaKnown RBP15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 CTNNA3Q9UI47 895 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 MAD2L2Q9UI95 211 aa15.23■□□□□ 0.03
TUBA3D-202ENST00000409047 TTC3P53804 2025 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 ZBTB5O15062 677 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 DCXO43602 365 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 ALADP13716 330 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 PTPROQ16827 1216 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 CTC1Q2NKJ3 1217 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 RILPL2Q969X0 211 aa15.22■□□□□ 0.03
TUBA3D-202ENST00000409047 FRMPD4Q14CM0 1322 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 C5orf67F2Z3F1 127 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 CYTH3O43739 400 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 DHX16O60231 1041 aaKnown RBP15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 CAND2O75155 1236 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 UPP2O95045 317 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 CTSHP09668 335 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 DLX2Q07687 328 aaPredicted RBP15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 FAM26DQ5JW98 314 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 TRIM50Q86XT4 487 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 PLEKHM2Q8IWE5 1019 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 SEPT8Q92599 483 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 YME1L1Q96TA2 773 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 NSUN3Q9H649 340 aaKnown RBP15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 PCDHA1Q9Y5I3 950 aa15.21■□□□□ 0.03
TUBA3D-202ENST00000409047 KIAA1671Q9BY89 1806 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 ICAM3P32942 547 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 IRS1P35568 1242 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 MFAP1P55081 439 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 RRP1P56182 461 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 NHLH1Q02575 133 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 ADHFE1Q8IWW8 467 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 FBXL18Q96ME1 805 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 INPP4AQ96PE3 977 aaPredicted RBP15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 GPR20Q99678 358 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 MLXIPQ9HAP2 919 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-202ENST00000409047 GRM6O15303 877 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 CHRNA1P02708 482 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 CCND2P30279 289 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 MRE11P49959 708 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 HYAL1Q12794 435 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 IFIT1BQ5T764 474 aaKnown RBP15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 HFE2Q6ZVN8 426 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 PIGSQ96S52 555 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 IFIH1Q9BYX4 1025 aaKnown RBP15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 EHMT1Q9H9B1 1298 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 SENP2Q9HC62 589 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 CLDND1Q9NY35 253 aa15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
TUBA3D-202ENST00000409047 SPATA31C2B4DYI2 1134 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 GTF2F1P35269 517 aaKnown RBP eCLIP15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 MGAT3Q09327 533 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 CAMK1Q14012 370 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 SMAD2Q15796 467 aaKnown RBP15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 CYFIP1Q7L576 1253 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
TUBA3D-202ENST00000409047 APBB2Q92870 758 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms