RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 V9GY48 417 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-204ENST00000407422 GOLGA8AA7E2F4 631 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 CKBP12277 381 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 SELPP16109 830 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 RAB30Q15771 203 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 NKX2-4Q9H2Z4 354 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 NAP1L2Q9ULW6 460 aaPredicted RBP22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 PCDHA6Q9UN73 950 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 PCDHA8Q9Y5H6 950 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 CUL9Q8IWT3 2517 aa22.15■■□□□ 1.14
SMARCB1-204ENST00000407422 REV3LO60673 3130 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 SPDYE3A6NKU9 549 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 H3BRB1 525 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 MYOGP15173 224 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 ATP2A2P16615 1042 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 ITGB5P18084 799 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 SP4Q02446 784 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 RBL2Q08999 1139 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 LRRC8DQ7L1W4 858 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 NLRX1Q86UT6 975 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 TUT1Q9H6E5 874 aaKnown RBP22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 TRANK1O15050 2925 aa22.14■■□□□ 1.14
SMARCB1-204ENST00000407422 ATP9AO75110 1047 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 ACTN1P12814 892 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 NAPAP54920 295 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 FGD1P98174 961 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 APOBRQ0VD83 1088 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 PTK7Q13308 1070 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 TRIM71Q2Q1W2 868 aaKnown RBP22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 Q6ZUG5 572 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 TRIM50Q86XT4 487 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 SENP7Q9BQF6 1050 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 USP26Q9BXU7 913 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 PTPRSQ13332 1948 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 ADD1P35611 737 aaKnown RBP22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 GPRASP2Q96D09 838 aa22.13■■□□□ 1.13
SMARCB1-204ENST00000407422 NBNO60934 754 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 SMIM10L2AP0DMW4 78 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 SMIM10L2BP0DMW5 78 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 KCNA2P16389 499 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 TRAF7Q6Q0C0 670 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 BLOC1S2Q6QNY1 142 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 BRF1Q92994 677 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 PRDM12Q9H4Q4 367 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 UBIAD1Q9Y5Z9 338 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 KAT6AQ92794 2004 aa22.12■■□□□ 1.13
SMARCB1-204ENST00000407422 STXBP3O00186 592 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 REC8O95072 547 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 NEFLP07196 543 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 ZNF618Q5T7W0 954 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 UTP14CQ5TAP6 766 aaKnown RBP22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 PGBD1Q96JS3 809 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 RNPEPQ9H4A4 650 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 SLC28A3Q9HAS3 691 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 RIC8AQ9NPQ8 531 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 PKD2L1Q9P0L9 805 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 PCDHA11Q9Y5I1 949 aa22.11■■□□□ 1.13
SMARCB1-204ENST00000407422 C17orf102A2RUQ5 167 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 HOXC8P31273 242 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 METAP2P50579 478 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 RCAN1P53805 252 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 TCTN1Q2MV58 587 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 SERINC5Q86VE9 423 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 ATP6V0A1Q93050 837 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 BARHL2Q9NY43 387 aa22.1■■□□□ 1.13
SMARCB1-204ENST00000407422 TREHO43280 583 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 RPS6KB1P23443 525 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 MTMR1Q13613 665 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 MBTPS1Q14703 1052 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 PPP1R18Q6NYC8 613 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 GIMAP8Q8ND71 665 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 CDHR1Q96JP9 859 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 JADE2Q9NQC1 790 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 SPTBN5Q9NRC6 3674 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 SMCO2A6NFE2 343 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 CXCL10P02778 98 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 ADCY7P51828 1080 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 CYP2W1Q8TAV3 490 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 SETD4Q9NVD3 440 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 TMEM260Q9NX78 707 aa22.09■■□□□ 1.13
SMARCB1-204ENST00000407422 TCF7P36402 384 aaPredicted RBP22.08■■□□□ 1.13
SMARCB1-204ENST00000407422 THPOP40225 353 aa22.08■■□□□ 1.13
SMARCB1-204ENST00000407422 PPP2R2DQ66LE6 453 aa22.08■■□□□ 1.13
SMARCB1-204ENST00000407422 SLC9A7Q96T83 725 aa22.08■■□□□ 1.13
SMARCB1-204ENST00000407422 ZNF215Q9UL58 517 aaPredicted RBP22.08■■□□□ 1.13
SMARCB1-204ENST00000407422 GSTTP1A0A1W2PQM5 241 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 hCG_1984214I3L0E3 225 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 DLL1O00548 723 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 BAIAP3O94812 1187 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 PARNO95453 639 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 ADGRE1Q14246 886 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 TMCO2Q7Z6W1 182 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 HERC6Q8IVU3 1022 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 ZNF713Q8N859 430 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 USP38Q8NB14 1042 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 PHOSPHO2Q8TCD6 241 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 ANO3Q9BYT9 981 aa22.07■■□□□ 1.12
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