RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 ZBTB5O15062 677 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 NOL4O94818 638 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 GCFC2P16383 781 aaKnown RBP17.33■□□□□ 0.36
TOM1-203ENST00000404284 MAGEA1P43355 309 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 GFPT1Q06210 699 aaPredicted RBP17.33■□□□□ 0.36
TOM1-203ENST00000404284 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
TOM1-203ENST00000404284 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 AENQ8WTP8 325 aaKnown RBP17.33■□□□□ 0.36
TOM1-203ENST00000404284 ALS2CR12Q96Q35 445 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 CXorf56Q9H5V9 222 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 SWAP70Q9UH65 585 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 PCDHA2Q9Y5H9 948 aa17.33■□□□□ 0.36
TOM1-203ENST00000404284 RBAK-RBAKDNI3L0D1 243 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 SLC1A4P43007 532 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 MRPL12P52815 198 aaKnown RBP17.32■□□□□ 0.36
TOM1-203ENST00000404284 GPATCH4Q5T3I0 446 aaKnown RBP17.32■□□□□ 0.36
TOM1-203ENST00000404284 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 USP21Q9UK80 565 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 TLR2O60603 784 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 RPS6KA5O75582 802 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 IVLP07476 585 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 TCP1P17987 556 aaKnown RBP17.32■□□□□ 0.36
TOM1-203ENST00000404284 DDR1Q08345 913 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 HDAC7Q8WUI4 952 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 CEP72Q9P209 647 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 SUGT1Q9Y2Z0 365 aa17.32■□□□□ 0.36
TOM1-203ENST00000404284 E9PMD0 336 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 TRAF5O00463 557 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 RIN2Q8WYP3 895 aaPredicted RBP17.31■□□□□ 0.36
TOM1-203ENST00000404284 LRRC1Q9BTT6 524 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 NT5C3AQ9H0P0 336 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 NLRC4Q9NPP4 1024 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
TOM1-203ENST00000404284 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 AGPSO00116 658 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 CCDC40Q4G0X9 1142 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 CCDC91Q7Z6B0 441 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 CEP63Q96MT8 703 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 SMARCAL1Q9NZC9 954 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
TOM1-203ENST00000404284 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
TOM1-203ENST00000404284 NCK2O43639 380 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 CXCR5P32302 372 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 MARSP56192 900 aaKnown RBP17.3■□□□□ 0.36
TOM1-203ENST00000404284 RASSF7Q02833 373 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 RUBCNQ92622 972 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 PSMB7Q99436 277 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 EHD2Q9NZN4 543 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 POTEB3A0JP26 581 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 POTECB2RU33 542 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 TOM1O60784 492 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
TOM1-203ENST00000404284 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 GGCXP38435 758 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 TDRD12Q587J7 1177 aaKnown RBP17.3■□□□□ 0.36
TOM1-203ENST00000404284 FAM83BQ5T0W9 1011 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 KLHDC7AQ5VTJ3 777 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 POTEBQ6S5H4 581 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 SYN2Q92777 582 aaPredicted RBP17.3■□□□□ 0.36
TOM1-203ENST00000404284 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 KIAA1024Q9UPX6 916 aa17.3■□□□□ 0.36
TOM1-203ENST00000404284 MARCH6O60337 910 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 UIMC1Q96RL1 719 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 HINFPQ9BQA5 517 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 LSM14BQ9BX40 385 aaKnown RBP17.29■□□□□ 0.36
TOM1-203ENST00000404284 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
TOM1-203ENST00000404284 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
TOM1-203ENST00000404284 CYP11B2P19099 503 aa17.29■□□□□ 0.36
TOM1-203ENST00000404284 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
TOM1-203ENST00000404284 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms