RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
USP16-202ENST00000399973 NFRKBQ6P4R8 1299 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 PSRC1Q6PGN9 363 aaPredicted RBP9.62□□□□□ -0.87
USP16-202ENST00000399973 CPLX2Q6PUV4 134 aaKnown RBP9.62□□□□□ -0.87
USP16-202ENST00000399973 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 FBXL16Q8N461 479 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 RASGRP4Q8TDF6 673 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 KAT2BQ92831 832 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 GPRASP2Q96D09 838 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 SCLYQ96I15 445 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 CDHR1Q96JP9 859 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP16-202ENST00000399973 GLT8D2Q9H1C3 349 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 C6orf50Q9HD87 102 aa9.62□□□□□ -0.87
USP16-202ENST00000399973 PTPRSQ13332 1948 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 DTNBO60941 627 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 SEC24BO95487 1268 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 FOSP01100 380 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 ITGB5P18084 799 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 AK2P54819 239 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 ANAPC15P60006 121 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 SSRP1Q08945 709 aaKnown RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 NTRK3Q16288 839 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 PKN1Q16512 942 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 Q7L0L9 218 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 DEFB128Q7Z7B8 93 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 CCDC155Q8N6L0 562 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 RETREG2Q8NC44 543 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 GIMAP8Q8ND71 665 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 ZNF274Q96GC6 653 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 GPR20Q99678 358 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 IL23AQ9NPF7 189 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 HDAC6Q9UBN7 1215 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 GTF2IRD1Q9UHL9 959 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 TELO2Q9Y4R8 837 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 UBIAD1Q9Y5Z9 338 aa9.61□□□□□ -0.87
USP16-202ENST00000399973 MYH9P35579 1960 aaKnown RBP9.61□□□□□ -0.87
USP16-202ENST00000399973 ESYT2A0FGR8 921 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ZBBXA8MT70 800 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 H3BRB1 525 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 DDX39AO00148 427 aaKnown RBP9.6□□□□□ -0.87
USP16-202ENST00000399973 ADAMTS3O15072 1205 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ATP9AO75110 1047 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 PPFIA4O75335 1185 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 CDKL5O76039 1030 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 DEXIO95424 95 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 HOXD8P13378 290 aaPredicted RBP9.6□□□□□ -0.87
USP16-202ENST00000399973 KCNA2P16389 499 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 GNA11P29992 359 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 TCF7P36402 384 aaPredicted RBP9.6□□□□□ -0.87
USP16-202ENST00000399973 SREBF1P36956 1147 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 EVCP57679 992 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 NLRP5P59047 1200 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 BFSP2Q13515 415 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ZNF365Q70YC5 407 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 BICD2Q8TD16 824 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 FAM161BQ96MY7 647 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 UIMC1Q96RL1 719 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 MXRA8Q9BRK3 442 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 ZMYND12Q9H0C1 365 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
USP16-202ENST00000399973 JPH1Q9HDC5 661 aaPredicted RBP9.6□□□□□ -0.87
USP16-202ENST00000399973 JADE2Q9NQC1 790 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
USP16-202ENST00000399973 LOXHD1Q8IVV2 1947 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 C17orf102A2RUQ5 167 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 HAS3O00219 553 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 SMIM10L2AP0DMW4 78 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 SMIM10L2BP0DMW5 78 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 MARK3P27448 753 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
USP16-202ENST00000399973 NEK4P51957 841 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 ZNF200P98182 395 aaPredicted RBP9.59□□□□□ -0.87
USP16-202ENST00000399973 SCRN1Q12765 414 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 CEP55Q53EZ4 464 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 TMEM240Q5SV17 173 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 LRRC8DQ7L1W4 858 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 OTOP2Q7RTS6 562 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 SESTD1Q86VW0 696 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 PLA2G4DQ86XP0 818 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 TEX2Q8IWB9 1127 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 DEFB123Q8N688 67 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 CYP2W1Q8TAV3 490 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 GLG1Q92896 1179 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 AIFM3Q96NN9 605 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 SENP7Q9BQF6 1050 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 C16orf70Q9BSU1 422 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 FTOQ9C0B1 505 aaKnown RBP eCLIP9.59□□□□□ -0.87
USP16-202ENST00000399973 MTIF3Q9H2K0 278 aaKnown RBP9.59□□□□□ -0.87
USP16-202ENST00000399973 KCNH7Q9NS40 1196 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 TCEAL9Q9UHQ7 104 aa9.59□□□□□ -0.87
USP16-202ENST00000399973 MICAL3Q7RTP6 2002 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms