RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 VAT1LQ9HCJ6 419 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 NDE1Q9NXR1 346 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 MAP3K4Q9Y6R4 1608 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 NEURL1BA8MQ27 555 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 EXOC5O00471 708 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 AKR1D1P51857 326 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 RPS6KA2Q15349 733 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 MMEL1Q495T6 779 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ARHGEF18Q6ZSZ5 1173 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TRMT10CQ7L0Y3 403 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 PEX26Q7Z412 305 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 PLIN2Q99541 437 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ZKSCAN3Q9BRR0 538 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 A0A087WWV3 80 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 XPOTO43592 962 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 AP2B1P63010 937 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 E4F1Q66K89 784 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 NXNQ6DKJ4 435 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 PDXDC1Q6P996 788 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 RUBCNQ92622 972 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 RPGRQ92834 1020 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 SIRT1Q96EB6 747 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 DNAJC17Q9NVM6 304 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 PDP2Q9P2J9 529 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TNRQ92752 1358 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CCDC189A1A4V9 331 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ENC1O14682 589 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GYG2O15488 501 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 MAP4P27816 1152 aaKnown RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 DEFA1P59665 94 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 DEFA3P59666 94 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GUCY2DQ02846 1103 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CEP78Q5JTW2 689 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ZMYM1Q5SVZ6 1142 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 JADE1Q6IE81 842 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 HEATR4Q86WZ0 1026 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 MCRS1Q96EZ8 462 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 DACH2Q96NX9 599 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 COPRSQ9NQ92 184 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 MED23Q9ULK4 1368 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 KSR1Q8IVT5 923 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CD248Q9HCU0 757 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 DSEQ9UL01 958 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 STRIP2Q9ULQ0 834 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 SKAP2O75563 359 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 DCTN3O75935 186 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 NDUFA10O95299 355 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 RPN1P04843 607 aaKnown RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ST5P78524 1137 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 KRT76Q01546 638 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GUCY1A3Q02108 690 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 ADCY2Q08462 1091 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 TUBA3CQ13748 450 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 KRT73Q86Y46 540 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 SERPINI1Q99574 410 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 MAGEF1Q9HAY2 307 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GPR108Q9NPR9 543 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 STX8Q9UNK0 236 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CHD1O14646 1710 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 CCND1P24385 295 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 WASHC5Q12768 1159 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 GATAD2AQ86YP4 633 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 L2HGDHQ9H9P8 463 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 HAUS2Q9NVX0 235 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 FBXL5Q9UKA1 691 aa10.36□□□□□ -0.75
SMAD9-203ENST00000399275 MED21Q13503 144 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 TNIP2Q8NFZ5 429 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 NSMCE1Q8WV22 266 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ATP6V1E2Q96A05 226 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 GINS4Q9BRT9 223 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 PCDHGA3Q9Y5H0 932 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 YEATS2Q9ULM3 1422 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 MMEP08473 750 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 RESP18Q5W5W9 173 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 UHMK1Q8TAS1 419 aaKnown RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 BRD8Q9H0E9 1235 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 MMADHCQ9H3L0 296 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ZFATQ9P243 1243 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms