RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ABRAQ8N0Z2 381 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TRIM58Q8NG06 486 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 MORC4Q8TE76 937 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 TSPAN18Q96SJ8 248 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 AIPL1Q9NZN9 384 aa6.5□□□□□ -1.37
PTPRD-206ENST00000397617 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 WNT10BO00744 389 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 CEBPZQ03701 1054 aaKnown RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 TEPSINQ96N21 525 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 MTRQ99707 1265 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 TUBGCP2Q9BSJ2 902 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 EXOC7Q9UPT5 735 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 DOCK1Q14185 1865 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 AP3M2P53677 418 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 TBCAO75347 108 aaKnown RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 CDC42EP1Q00587 391 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 SHISA4Q96DD7 197 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ARMCX3Q9UH62 379 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 PTPRFP10586 1907 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 IGLV3-22A0A075B6J6 115 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 KCNJ18B7U540 433 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 RBAK-RBAKDNI3L0D1 243 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 GH2P01242 217 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 MCM7P33993 719 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 KCNJ12Q14500 433 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 KRT31Q15323 416 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 GLE1Q53GS7 698 aaKnown RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 INTS8Q75QN2 995 aaKnown RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 VSIG10LQ86VR7 867 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 SLF1Q9BQI6 1058 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 PSMD14O00487 310 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF189O75820 626 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 LMNB1P20700 586 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 NPEPPSP55786 919 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 BACE1P56817 501 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF174Q15697 407 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 USP49Q70CQ1 688 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ZNF572Q7Z3I7 529 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 UBIAD1Q9Y5Z9 338 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ADGRG1Q9Y653 693 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 DGAT1O75907 488 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 KRT9P35527 623 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 BRD3Q15059 726 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 EPM2AIP1Q7L775 607 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-206ENST00000397617 PDILTQ8N807 584 aa6.49□□□□□ -1.37
PTPRD-206ENST00000397617 ZBED4O75132 1171 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 RXRAP19793 462 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 COG2Q14746 738 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 E4F1Q66K89 784 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 KIFAP3Q92845 792 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 COQ4Q9Y3A0 265 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 P4HBP07237 508 aaKnown RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PTGS1P23219 599 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TBC1D8BQ0IIM8 1120 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 BRDTQ58F21 947 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PDE4DIPQ5VU43 2346 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 SCYL3Q8IZE3 742 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 DDTLA6NHG4 134 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TNNT1P13805 278 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 NSUN6Q8TEA1 469 aaKnown RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 NDST4Q9H3R1 872 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PARVGQ9HBI0 331 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 V9GYY5 206 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PARP14Q460N5 1801 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 RBBP6Q7Z6E9 1792 aaKnown RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 RLFQ13129 1914 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 ERLIN1O75477 346 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PAX3P23760 479 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 NF2P35240 595 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 GRIK5Q16478 980 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 ECM1Q16610 540 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PRMT6Q96LA8 375 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TMEM60Q9H2L4 133 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 MYOZ2Q9NPC6 264 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PHF20L1A8MW92 1017 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 MARCH6O60337 910 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PSMD10O75832 226 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 SH3BP5LQ7L8J4 393 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 CEP72Q9P209 647 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 JRKLQ9Y4A0 524 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 A0A0A6YYK5 440 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 SHTN1A0MZ66 631 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TMEM232C9JQI7 657 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 FLOT1O75955 427 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TRIM21P19474 475 aaKnown RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 PNOCQ13519 176 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 SLC9C1Q4G0N8 1177 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 CCDC70Q6NSX1 233 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 TMC6Q7Z403 805 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 ANKRD35Q8N283 1001 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 GPR161Q8N6U8 529 aaKnown RBP6.48□□□□□ -1.37
PTPRD-206ENST00000397617 NELFBQ8WX92 580 aa6.48□□□□□ -1.37
PTPRD-206ENST00000397617 RSPH1Q8WYR4 309 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms