RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TMTC3Q6ZXV5 915 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 USP38Q8NB14 1042 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 USP28Q96RU2 1077 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 MPHOSPH6Q99547 160 aaKnown RBP19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 MTIF3Q9H2K0 278 aaKnown RBP19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 SCN10AQ9Y5Y9 1956 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 SMARCA1P28370 1054 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 OR6J1Q8NGC5 347 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 SCFD2Q8WU76 684 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 PHKBQ93100 1093 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 VWCEQ96DN2 955 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 CPVLQ9H3G5 476 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 TRMT13Q9NUP7 481 aaKnown RBP19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 MYO9BQ13459 2157 aa19.88■□□□□ 0.77
TNFSF13-205ENST00000396545 NKRFO15226 690 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 PRPF3O43395 683 aaKnown RBP19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 LIG1P18858 919 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 TRIM29Q14134 588 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 RAB30Q15771 203 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 USH1GQ495M9 461 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 OTOP2Q7RTS6 562 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 AIFM3Q96NN9 605 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 MTG1Q9BT17 334 aaPredicted RBP19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 SLC26A6Q9BXS9 759 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 UBA5Q9GZZ9 404 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 RTEL1Q9NZ71 1219 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 TRANK1O15050 2925 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 A6NJR5 290 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 MYL3P08590 195 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 XBP1P17861 261 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 KRT40Q6A162 431 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 MAF1Q9H063 256 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 GJB4Q9NTQ9 266 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 MSRAQ9UJ68 235 aa19.87■□□□□ 0.77
TNFSF13-205ENST00000396545 GOLGA6L4A6NEF3 574 aa19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 SUPT20HL2P0C7V6 817 aa19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 CYP2C9P11712 490 aa19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 FUT2Q10981 343 aa19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 CDC37Q16543 378 aaPredicted RBP19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 BRDTQ58F21 947 aaPredicted RBP19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 RPUSD2Q8IZ73 545 aaKnown RBP19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 FAM177A1Q8N128 213 aaPredicted RBP19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 FUCA2Q9BTY2 467 aa19.86■□□□□ 0.77
TNFSF13-205ENST00000396545 GBF1Q92538 1859 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 B4DLN1 442 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 YEATS4O95619 227 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 MRPL12P52815 198 aaKnown RBP19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 MYSM1Q5VVJ2 828 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 COPS5Q92905 334 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 SCLYQ96I15 445 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 GAS2L1Q99501 681 aaPredicted RBP19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 FTOQ9C0B1 505 aaKnown RBP eCLIP19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 PRDM12Q9H4Q4 367 aa19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 DDX19AQ9NUU7 478 aaKnown RBP19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 YBX2Q9Y2T7 364 aaKnown RBP19.85■□□□□ 0.77
TNFSF13-205ENST00000396545 PALM3A6NDB9 673 aaPredicted RBP19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 KPNA6O60684 536 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 ARIH2O95376 493 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 PARP1P09874 1014 aaKnown RBP19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 TXNP10599 105 aaKnown RBP19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 NBPF20Q3BBV1 942 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 ASPRV1Q53RT3 343 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 NFRKBQ6P4R8 1299 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 ADGRF4Q8IZF3 695 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 ABCB11O95342 1321 aa19.84■□□□□ 0.77
TNFSF13-205ENST00000396545 REV3LO60673 3130 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 PFKMP08237 780 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 U2AF2P26368 475 aaKnown RBP eCLIP19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 TTLL4Q14679 1199 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 SYTL5Q8TDW5 730 aaPredicted RBP19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 TBC1D5Q92609 795 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 NKX2-4Q9H2Z4 354 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 MAD2L2Q9UI95 211 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 SLC4A7Q9Y6M7 1214 aa19.83■□□□□ 0.77
TNFSF13-205ENST00000396545 ADGRE1Q14246 886 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 SAFBQ15424 915 aaKnown RBP eCLIP19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 TPRNQ4KMQ1 711 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 CCDC62Q6P9F0 684 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 RBM43Q6ZSC3 357 aaKnown RBP19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 LINC00301Q8NCQ3 95 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 BICD2Q8TD16 824 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 PPP1R9BQ96SB3 815 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 SPZ1Q9BXG8 430 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 NUP62CLQ9H1M0 184 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 DACT1Q9NYF0 836 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 COL20A1Q9P218 1284 aa19.83■□□□□ 0.76
TNFSF13-205ENST00000396545 CNTNAP5Q8WYK1 1306 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 PLEKHA8P1O95397 391 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 CEBPZQ03701 1054 aaKnown RBP19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 QRICH1Q2TAL8 776 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 FAM47CQ5HY64 1035 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 SRBD1Q8N5C6 995 aaKnown RBP19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 NSUN6Q8TEA1 469 aaKnown RBP19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 CLSTN2Q9H4D0 955 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 SLC28A3Q9HAS3 691 aa19.82■□□□□ 0.76
TNFSF13-205ENST00000396545 PITPNM1O00562 1244 aa19.81■□□□□ 0.76
TNFSF13-205ENST00000396545 RABGGTBP53611 331 aa19.81■□□□□ 0.76
TNFSF13-205ENST00000396545 PTPN11Q06124 597 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms