RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.28■□□□□ 0.847e-8■■□□□ 12.7
EXOSC3-202ENST00000396521 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 ZNF215Q9UL58 517 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-202ENST00000396521 KIAA1217Q5T5P2 1943 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 PRR33A8MZF0 331 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 H3BNC9 293 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 HOXA13P31271 388 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 SP2Q02086 613 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 EPC2Q52LR7 807 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 C17orf80Q9BSJ5 609 aa20.27■□□□□ 0.84
EXOSC3-202ENST00000396521 PNMA6FA0A0J9YX94 578 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 ERICH2A1L162 156 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 GRXCR2A6NFK2 248 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 PPP1R11O60927 126 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 LGALS2P05162 132 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 SMIM10L2AP0DMW4 78 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 SMIM10L2BP0DMW5 78 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 PTCRAQ6ISU1 281 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 XRRA1Q6P2D8 792 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 GIMAP8Q8ND71 665 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 NEK9Q8TD19 979 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 INPP4AQ96PE3 977 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 RNPEPQ9H4A4 650 aa20.26■□□□□ 0.83
EXOSC3-202ENST00000396521 FIBPO43427 364 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 HIC1Q14526 733 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 SART3Q15020 963 aaKnown RBP20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 BANK1Q8NDB2 785 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 PABPC5Q96DU9 382 aaKnown RBP20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 SENP7Q9BQF6 1050 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 RWDD3Q9Y3V2 267 aa20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
EXOSC3-202ENST00000396521 SPATA31C2B4DYI2 1134 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 TREHO43280 583 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 RB1P06400 928 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 SSTR3P32745 418 aaPredicted RBP20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 GPM6BQ13491 265 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 GRM4Q14833 912 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 COL19A1Q14993 1142 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 FAM26DQ5JW98 314 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 FCHSD1Q86WN1 690 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 TMEM192Q8IY95 271 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 IL31RAQ8NI17 732 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 CD320Q9NPF0 282 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 C11orf16Q9NQ32 467 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 FRMPD4Q14CM0 1322 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 NRCAMQ92823 1304 aa20.24■□□□□ 0.83
EXOSC3-202ENST00000396521 RPLP2P05387 115 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 TAF2Q6P1X5 1199 aa20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 KHSRPQ92945 711 aaKnown RBP eCLIP20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 PIGSQ96S52 555 aa20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 IFIH1Q9BYX4 1025 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 LMAN2LQ9H0V9 348 aa20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 NSUN3Q9H649 340 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-202ENST00000396521 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 RUFY2Q8WXA3 655 aa20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 IL17RAQ96F46 866 aa20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 GPR20Q99678 358 aa20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
EXOSC3-202ENST00000396521 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 SORBS3O60504 671 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 ADAM17P78536 824 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 MRPS9P82933 396 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 TROAPQ12815 778 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CYFIP1Q7L576 1253 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 RSPH3Q86UC2 560 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CUL5Q93034 780 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 CDHR1Q96JP9 859 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 MAP3K14Q99558 947 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 KCNH6Q9H252 994 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 COL4A4P53420 1690 aaPredicted RBP20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 MUC6Q6W4X9 2439 aa20.21■□□□□ 0.83
EXOSC3-202ENST00000396521 C5orf67F2Z3F1 127 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 UPP2O95045 317 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 IL9P15248 144 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 WTAPQ15007 396 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 PCNX4Q63HM2 1172 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 FIBCD1Q8N539 461 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 SIP14410 1827 aa20.2■□□□□ 0.82
EXOSC3-202ENST00000396521 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.19■□□□□ 0.82
EXOSC3-202ENST00000396521 PIK3CDO00329 1044 aa20.19■□□□□ 0.82
EXOSC3-202ENST00000396521 CYTH3O43739 400 aa20.19■□□□□ 0.82
EXOSC3-202ENST00000396521 CTSHP09668 335 aa20.19■□□□□ 0.82
EXOSC3-202ENST00000396521 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms