RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
VAMP1-202ENST00000396308 PSMD10O75832 226 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 EDNRBP24530 442 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 FCGRTP55899 365 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 KRT76Q01546 638 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 KARSQ15046 597 aaKnown RBP17.31■□□□□ 0.36
VAMP1-202ENST00000396308 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 NEK9Q8TD19 979 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
VAMP1-202ENST00000396308 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
VAMP1-202ENST00000396308 SYCE3A1L190 88 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 CHMP2AO43633 222 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 SLFN14P0C7P3 912 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 SFNP31947 248 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 JAK3P52333 1124 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 SASS6Q6UVJ0 657 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
VAMP1-202ENST00000396308 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 LRRC27Q9C0I9 530 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 SERTAD1Q9UHV2 236 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 VAV3Q9UKW4 847 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 SAMM50Q9Y512 469 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 DOCK5Q9H7D0 1870 aa17.3■□□□□ 0.36
VAMP1-202ENST00000396308 NFASCO94856 1347 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 DDX39AO00148 427 aaKnown RBP17.29■□□□□ 0.36
VAMP1-202ENST00000396308 SMC2O95347 1197 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 PLCG1P19174 1290 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 CDC25AP30304 524 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 ICAM3P32942 547 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 RGS2P41220 211 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 AMPD3Q01432 767 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 SEPT14Q6ZU15 432 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
VAMP1-202ENST00000396308 KCTD17Q8N5Z5 321 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 GJA10Q969M2 543 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 ZIC5Q96T25 663 aa17.29■□□□□ 0.36
VAMP1-202ENST00000396308 ASTN1O14525 1302 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 ACTN4O43707 911 aaKnown RBP17.28■□□□□ 0.36
VAMP1-202ENST00000396308 CCDC192P0DO97 292 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 TGFB3P10600 412 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 MUTP22033 750 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 MAP2K5Q13163 448 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 NEDD9Q14511 834 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 POSTNQ15063 836 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 MORC4Q8TE76 937 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
VAMP1-202ENST00000396308 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
VAMP1-202ENST00000396308 SYNGAP1Q96PV0 1343 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 WDR64B1ANS9 1081 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.36
VAMP1-202ENST00000396308 MYL1P05976 194 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 RPA1P27694 616 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 VEGFBP49765 207 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 ZNF445P59923 1031 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 SPIRE1Q08AE8 756 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 EPHA7Q15375 998 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-202ENST00000396308 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-202ENST00000396308 APBA2Q99767 749 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-202ENST00000396308 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 R3HDMLQ9H3Y0 253 aa17.27■□□□□ 0.36
VAMP1-202ENST00000396308 JPH1Q9HDC5 661 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-202ENST00000396308 WDR81Q562E7 1941 aa17.27■□□□□ 0.35
VAMP1-202ENST00000396308 A0A087X0B3 334 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 COBLO75128 1261 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 ITGB3BPQ13352 177 aaPredicted RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 E2F4Q16254 413 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 TMEM119Q4V9L6 283 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 HYIQ5T013 277 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 MORN1Q5T089 497 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 RBM43Q6ZSC3 357 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 FGD4Q96M96 766 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 PLIN2Q99541 437 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 SENP7Q9BQF6 1050 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 MMTAG2Q9BU76 263 aaKnown RBP17.26■□□□□ 0.35
VAMP1-202ENST00000396308 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
VAMP1-202ENST00000396308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms