RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ACAD9Q9H845 621 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 EPN1Q9Y6I3 576 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TAF1LQ8IZX4 1826 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 FOXP2O15409 715 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 EEF2P13639 858 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PLCG1P19174 1290 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CDC27P30260 824 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MAN1A1P33908 653 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CYB5R4Q7L1T6 521 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TPH2Q8IWU9 490 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ADGRF4Q8IZF3 695 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PIGSQ96S52 555 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC77Q9BR77 488 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TMEM51Q9NW97 253 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PARP2Q9UGN5 583 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DEPTORQ8TB45 409 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 TCP11Q8WWU5 503 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 GPKOWQ92917 476 aaPredicted RBP eCLIP3.71□□□□□ -1.81
VPS13C-203ENST00000395896 SYNCQ9H7C4 482 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 IFT122Q9HBG6 1241 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 C1orf112Q9NSG2 853 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 SAR1BQ9Y6B6 198 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 PLIN4Q96Q06 1357 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 EFCAB8A8MWE9 144 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 EIF3CLB5ME19 914 aaKnown RBP3.71□□□□□ -1.81
VPS13C-203ENST00000395896 K7ERI5 159 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 KCTD1Q719H9 257 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 ENGASEQ8NFI3 743 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 EIF3CQ99613 913 aaKnown RBP3.71□□□□□ -1.81
VPS13C-203ENST00000395896 KBTBD4Q9NVX7 518 aa3.71□□□□□ -1.81
VPS13C-203ENST00000395896 RIF1Q5UIP0 2472 aaKnown RBP3.71□□□□□ -1.81
VPS13C-203ENST00000395896 P4HBP07237 508 aaKnown RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PSAPP07602 524 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ALAS1P13196 640 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 CALCOCO2Q13137 446 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 MXD4Q14582 209 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PCBP1Q15365 356 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 FIGNQ5HY92 759 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 RSPH3Q86UC2 560 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 WRNIP1Q96S55 665 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 C7orf25Q9BPX7 421 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 TDRD3Q9H7E2 651 aaKnown RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 OLFML3Q9NRN5 406 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 SERTAD1Q9UHV2 236 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 LAMB2P55268 1798 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 C4BP0C0L5 1744 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 EIF3DO15371 548 aaKnown RBP eCLIP3.71□□□□□ -1.825e-6■□□□□ 8.9
VPS13C-203ENST00000395896 ATP8B1O43520 1251 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 CAP2P40123 477 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP8P40818 1118 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 POLGP54098 1239 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 BACE1P56817 501 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 LIN9Q5TKA1 542 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ISM2Q6H9L7 571 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 GPC2Q8N158 579 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 DEFB129Q9H1M3 183 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 MTRF1LQ9UGC7 380 aaKnown RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PCDHB6Q9Y5E3 794 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ITIH6Q6UXX5 1313 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 CNTNAP5Q8WYK1 1306 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 GAS8O95995 478 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PTGS1P23219 599 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 SREBF1P36956 1147 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ANTXR2P58335 489 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PTK2Q05397 1052 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 TRPC3Q13507 836 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 PNOCQ13519 176 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 EXOC3L4Q17RC7 722 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 DCAF17Q5H9S7 520 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF746Q6NUN9 644 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 MTMR14Q8NCE2 650 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 DNERQ8NFT8 737 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 POLLQ9UGP5 575 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 LMNB2Q03252 620 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 EN1Q05925 392 aaPredicted RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 TTLL4Q14679 1199 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 QRICH1Q2TAL8 776 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 MIS18BP1Q6P0N0 1132 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 GPR161Q8N6U8 529 aaKnown RBP3.71□□□□□ -1.82
VPS13C-203ENST00000395896 CHST13Q8NET6 341 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 HPS5Q9UPZ3 1129 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 HPSEQ9Y251 543 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 ATRNL1Q5VV63 1379 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 LTBP4Q8N2S1 1624 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 TCP10L2B9ZVM9 353 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 NDUFB10O96000 172 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 FERP16591 822 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 SFMBT2Q5VUG0 894 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 BEGAINQ9BUH8 593 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L15C9J2P7 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L13C9JLJ4 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L11C9JVI0 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L18D6R9N7 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L22D6RA61 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L17D6RBQ6 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L19D6RCP7 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 USP17L20D6RJB6 530 aa3.71□□□□□ -1.82
VPS13C-203ENST00000395896 P4HA2O15460 535 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms