RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 PRR16Q569H4 304 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 PDXDC1Q6P996 788 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 ZDHHC15Q96MV8 337 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 FGFBP2Q9BYJ0 223 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 QTRT2Q9H974 415 aaKnown RBP10.22□□□□□ -0.77
CDRT1-203ENST00000395667 PI4KBQ9UBF8 816 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 CAPN6Q9Y6Q1 641 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 ADAMTSL1Q8N6G6 1762 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 DDTLA6NHG4 134 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-203ENST00000395667 USH1GQ495M9 461 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 ZCWPW2Q504Y3 356 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 HYIQ5T013 277 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 ANKRD13CQ8N6S4 541 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 BAP1Q92560 729 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 LSM14BQ9BX40 385 aaKnown RBP10.22□□□□□ -0.77
CDRT1-203ENST00000395667 ADAM21Q9UKJ8 722 aa10.22□□□□□ -0.77
CDRT1-203ENST00000395667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDRT1-203ENST00000395667 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 ZMYND10O75800 440 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 GDF11O95390 407 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 POTEIP0CG38 1075 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 ARHGAP4P98171 946 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 GFPT1Q06210 699 aaPredicted RBP10.21□□□□□ -0.77
CDRT1-203ENST00000395667 C2orf54Q08AI8 447 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 TAF3Q5VWG9 929 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 TXLNBQ8N3L3 684 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 MASTLQ96GX5 879 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 CEP63Q96MT8 703 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 KCNMB3Q9NPA1 279 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 NYAP2Q9P242 653 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
CDRT1-203ENST00000395667 SNX12Q9UMY4 172 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 C10orf71Q711Q0 1435 aa10.21□□□□□ -0.77
CDRT1-203ENST00000395667 SPDYE3A6NKU9 549 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 PDE2AO00408 941 aaPredicted RBP10.21□□□□□ -0.78
CDRT1-203ENST00000395667 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.78
CDRT1-203ENST00000395667 MED24O75448 989 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 GNA14O95837 355 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 CYP11B2P19099 503 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 LMAN1P49257 510 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 POLR2FP61218 127 aaKnown RBP10.21□□□□□ -0.78
CDRT1-203ENST00000395667 KCNMA1Q12791 1236 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 SLC9C1Q4G0N8 1177 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 SFMBT2Q5VUG0 894 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 FOXR2Q6PJQ5 311 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 ERMNQ8TAM6 284 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 PSMB7Q99436 277 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 AMNQ9BXJ7 453 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.78
CDRT1-203ENST00000395667 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 TARSL2A2RTX5 802 aaKnown RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 F5H6K3 240 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 PHACTR2O75167 634 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MMP10P09238 476 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 RASSF7Q02833 373 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 KLRC3Q07444 240 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 AP3B2Q13367 1082 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 ADAM9Q13443 819 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 FAM83BQ5T0W9 1011 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CCDC181Q5TID7 509 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MKL1Q969V6 931 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 NUCKS1Q9H1E3 243 aaKnown RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CEP72Q9P209 647 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 ANKRD31Q8N7Z5 1873 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MEIS1O00470 390 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MEIS2O14770 477 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CETN3O15182 167 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 LCA5LO95447 670 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 ARID5AQ03989 594 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 PABPC4Q13310 644 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 ENOX2Q16206 610 aaKnown RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 ABCB5Q2M3G0 1257 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 SCFD1Q8WVM8 642 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 EXOC4Q96A65 974 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 GDAP1L1Q96MZ0 367 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 LUC7LQ9NQ29 371 aaKnown RBP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 QSER1Q2KHR3 1735 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CYP3A7-CYP3A51PA0A087WV96 503 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 SSU72P8A0A1W2PR75 194 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CYP3A7P24462 503 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 CXCR5P32302 372 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 MATR3P43243 847 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDRT1-203ENST00000395667 RAPGEF1Q13905 1077 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 TMEM179Q6ZVK1 233 aa10.2□□□□□ -0.78
CDRT1-203ENST00000395667 NOX5Q96PH1 765 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms