RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SLC35G1Q2M3R5 365 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 LEXMQ3ZCV2 418 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 PIGSQ96S52 555 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 C11orf16Q9NQ32 467 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 PI4K2BG5E9Z4 385 aa24.48■■□□□ 1.51
TRAF4-203ENST00000394925 LGALS2P05162 132 aa24.48■■□□□ 1.51
TRAF4-203ENST00000394925 AAMPQ13685 434 aa24.48■■□□□ 1.51
TRAF4-203ENST00000394925 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.48■■□□□ 1.51
TRAF4-203ENST00000394925 SP7Q8TDD2 431 aaPredicted RBP24.48■■□□□ 1.51
TRAF4-203ENST00000394925 IL25Q9H293 177 aa24.48■■□□□ 1.51
TRAF4-203ENST00000394925 RNPEPQ9H4A4 650 aa24.48■■□□□ 1.51
TRAF4-203ENST00000394925 NOP56O00567 594 aaKnown RBP24.47■■□□□ 1.51
TRAF4-203ENST00000394925 CTSHP09668 335 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 HOXC8P31273 242 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 TRAF1Q13077 416 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 EPC2Q52LR7 807 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 FAM178BQ8IXR5 827 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 SEPT8Q92599 483 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 MRPL38Q96DV4 380 aaKnown RBP24.47■■□□□ 1.51
TRAF4-203ENST00000394925 OSBPL7Q9BZF2 842 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 RIOX1Q9H6W3 641 aa24.47■■□□□ 1.51
TRAF4-203ENST00000394925 ARIH1Q9Y4X5 557 aaPredicted RBP24.47■■□□□ 1.51
TRAF4-203ENST00000394925 UPP2O95045 317 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 IL9P15248 144 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 GRM4Q14833 912 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 GJD3Q8N144 294 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 YME1L1Q96TA2 773 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 DOCK5Q9H7D0 1870 aa24.46■■□□□ 1.51
TRAF4-203ENST00000394925 HOXD11P31277 338 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-203ENST00000394925 TRDNQ13061 729 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 PTPROQ16827 1216 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 PTCRAQ6ISU1 281 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-203ENST00000394925 CYFIP1Q7L576 1253 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 TOP1MTQ969P6 601 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 SAMD11Q96NU1 681 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 USP26Q9BXU7 913 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 SETD4Q9NVD3 440 aa24.45■■□□□ 1.5
TRAF4-203ENST00000394925 IFIT3O14879 490 aaKnown RBP24.44■■□□□ 1.5
TRAF4-203ENST00000394925 CYTH3O43739 400 aa24.44■■□□□ 1.5
TRAF4-203ENST00000394925 SSTR3P32745 418 aaPredicted RBP24.44■■□□□ 1.5
TRAF4-203ENST00000394925 MRPS9P82933 396 aaKnown RBP24.44■■□□□ 1.5
TRAF4-203ENST00000394925 GPM6BQ13491 265 aa24.44■■□□□ 1.5
TRAF4-203ENST00000394925 GNPTABQ3T906 1256 aa24.44■■□□□ 1.5
TRAF4-203ENST00000394925 SENP2Q9HC62 589 aa24.44■■□□□ 1.5
TRAF4-203ENST00000394925 MYO7AQ13402 2215 aa24.44■■□□□ 1.5
TRAF4-203ENST00000394925 PNMA6FA0A0J9YX94 578 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 CAND2O75155 1236 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 NEDD9Q14511 834 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 PIBF1Q8WXW3 757 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 GPR20Q99678 358 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 RTEL1Q9NZ71 1219 aa24.43■■□□□ 1.5
TRAF4-203ENST00000394925 MUC6Q6W4X9 2439 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-203ENST00000394925 H3BNC9 293 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 H3BQ06 376 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-203ENST00000394925 GNAT1P11488 350 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 ICAM3P32942 547 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 SEMA3FQ13275 785 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 TIGD5Q53EQ6 642 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 METTL7BQ6UX53 244 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 TRIM50Q86XT4 487 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 TMEM192Q8IY95 271 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 BANK1Q8NDB2 785 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 INPP4AQ96PE3 977 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-203ENST00000394925 NLRC5Q86WI3 1866 aa24.42■■□□□ 1.5
TRAF4-203ENST00000394925 FRMPD4Q14CM0 1322 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 KAT6AQ92794 2004 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 ERICH2A1L162 156 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 GRXCR2A6NFK2 248 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 SPATA31C2B4DYI2 1134 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 STAM2O75886 525 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 UTP14CQ5TAP6 766 aaKnown RBP24.41■■□□□ 1.5
TRAF4-203ENST00000394925 EP400NLQ6ZTU2 488 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 NEK9Q8TD19 979 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 IFIH1Q9BYX4 1025 aaKnown RBP24.41■■□□□ 1.5
TRAF4-203ENST00000394925 TELO2Q9Y4R8 837 aa24.41■■□□□ 1.5
TRAF4-203ENST00000394925 FIBPO43427 364 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 CYP21A2P08686 494 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 ARHGAP4P98171 946 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 SP4Q02446 784 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 WTAPQ15007 396 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 TCEAL5Q5H9L2 206 aa24.4■■□□□ 1.5
TRAF4-203ENST00000394925 ZNF215Q9UL58 517 aaPredicted RBP24.4■■□□□ 1.5
TRAF4-203ENST00000394925 TROAPQ12815 778 aa24.39■■□□□ 1.49
TRAF4-203ENST00000394925 PUS10Q3MIT2 529 aaKnown RBP24.39■■□□□ 1.49
TRAF4-203ENST00000394925 APBB2Q92870 758 aa24.39■■□□□ 1.49
TRAF4-203ENST00000394925 U3KPZ7 1027 aaPredicted RBP24.39■■□□□ 1.49
TRAF4-203ENST00000394925 ADAM17P78536 824 aa24.38■■□□□ 1.49
TRAF4-203ENST00000394925 FAM26DQ5JW98 314 aa24.38■■□□□ 1.49
TRAF4-203ENST00000394925 RALYLQ86SE5 291 aaKnown RBP24.38■■□□□ 1.49
TRAF4-203ENST00000394925 LMBR1Q8WVP7 490 aa24.38■■□□□ 1.49
TRAF4-203ENST00000394925 PABPC5Q96DU9 382 aaKnown RBP24.38■■□□□ 1.49
TRAF4-203ENST00000394925 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
TRAF4-203ENST00000394925 RALGAPA2Q2PPJ7 1873 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 PTH1RQ03431 593 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 SART3Q15020 963 aaKnown RBP24.37■■□□□ 1.49
TRAF4-203ENST00000394925 CATIPQ7Z7H3 387 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 SMARCC2Q8TAQ2 1214 aa24.37■■□□□ 1.49
TRAF4-203ENST00000394925 IL17RAQ96F46 866 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms