RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 ZNFX1Q9P2E3 1918 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ORC4O43929 436 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 NOVP48745 357 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ACLYP53396 1101 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TUBB4BP68371 445 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 BEND6Q5SZJ8 279 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZNF697Q5TEC3 545 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GLT1D1Q96MS3 346 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 UPF3BQ9BZI7 483 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FAN1Q9Y2M0 1017 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CTAGE5O15320 804 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PGK1P00558 417 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FGRP09769 529 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MRPL12P52815 198 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GJA9P57773 515 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SCRN1Q12765 414 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GRIK3Q13003 919 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 OTUD6BQ8N6M0 293 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 BADQ92934 168 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TATDN2Q93075 761 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MAF1Q9H063 256 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CABYRO75952 493 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PDE1AP54750 535 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ADCY2Q08462 1091 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 STX1AQ16623 288 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CCSAPQ6IQ19 270 aaPredicted RBP12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 STK11IPQ8N1F8 1099 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RAG1P15918 1043 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CHMLP26374 656 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 IKQ13123 557 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ARMCX2Q7L311 632 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FAM133AQ8N9E0 248 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TRIM43Q96BQ3 446 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TMEM39AQ9NV64 488 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 Q9Y3F1 56 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CHUKO15111 745 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ERLIN1O75477 346 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 NEBLO76041 1014 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FPGSQ05932 587 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ARMCX5Q6P1M9 558 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CPLX2Q6PUV4 134 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CTCFLQ8NI51 663 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZSCAN31Q96LW9 406 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MRFAP1Q9Y605 127 aa12.74□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZEB2O60315 1214 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GJB2P29033 226 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SHHQ15465 462 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 KCNA10Q16322 511 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 Q7L0L9 218 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 JPH2Q9BR39 696 aaPredicted RBP12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 EPC1Q9H2F5 836 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 BECN2A8MW95 431 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RTN2O75298 545 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 LIG3P49916 1009 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 HSP90B2PQ58FF3 399 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 BTNL9Q6UXG8 535 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PQBP1O60828 265 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TIMP1P01033 207 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ICAM1P05362 532 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms