RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 CCSER1Q9C0I3 900 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 BAIAP2L1Q9UHR4 511 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 PTPAQ15257 358 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 HDAC6Q9UBN7 1215 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 NFU1Q9UMS0 254 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 STAG2Q8N3U4 1231 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 PARVGQ9HBI0 331 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 TYW1Q9NV66 732 aaKnown RBP17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 SLIT1O75093 1534 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 VPS41P49754 854 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 MFAP3P55082 362 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 CSRNP1Q96S65 589 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 VPS37BQ9H9H4 285 aa17.57■□□□□ 0.4
PTPRN2-201ENST00000389413 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 DLATP10515 647 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 FXR1P51114 621 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 ATP8A1Q9Y2Q0 1164 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 MRPS25P82663 173 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 SYDE2Q5VT97 1194 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 ADSSL1Q8N142 457 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 RNF10Q8N5U6 811 aaKnown RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 PPFIBP2Q8ND30 876 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 DEPTORQ8TB45 409 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 CCPG1Q9ULG6 757 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 H0YCG3 227 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 ZBTB5O15062 677 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 LRRN2O75325 713 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 PALMO75781 387 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 GDF11O95390 407 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 LIG4P49917 911 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 UBXN2AP68543 259 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 IFT88Q13099 833 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 DMP1Q13316 513 aaPredicted RBP17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 BHMT2Q9H2M3 363 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 CD209Q9NNX6 404 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
PTPRN2-201ENST00000389413 THAP12O43422 761 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 HSPA6P17066 643 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 NR1D1P20393 614 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 PLTPP55058 493 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 AP3B2Q13367 1082 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 P3H4Q92791 437 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 NT5C1BQ96P26 610 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 COA1Q9GZY4 146 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 CUL1Q13616 776 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 RAD9BQ6WBX8 426 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 STMN2Q93045 179 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 CHP1Q99653 195 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 KLHL14Q9P2G3 628 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 FAM83BQ5T0W9 1011 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 OSBPL9Q96SU4 736 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 MXD3Q9BW11 206 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 L2HGDHQ9H9P8 463 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 INTS9Q9NV88 658 aaKnown RBP17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 TMEM260Q9NX78 707 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 VGLL3A8MV65 326 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 IFNB1P01574 187 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 COASYQ13057 564 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 GNPTABQ3T906 1256 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 ACCSQ96QU6 501 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 TRIM9Q9C026 710 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 AZI2Q9H6S1 392 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 TMEM206Q9H813 350 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 RAB20Q9NX57 234 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 HPSEQ9Y251 543 aa17.55■□□□□ 0.4
PTPRN2-201ENST00000389413 CCDC188H7C350 402 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 GRIN1Q05586 938 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 ANKRD40Q6AI12 368 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 NIM1KQ8IY84 436 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 CCDC89Q8N998 374 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 HOOK2Q96ED9 719 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 MYO1FO00160 1098 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 FCER1AP12319 257 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 ATF2P15336 505 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 GGCXP38435 758 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 VSNL1P62760 191 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 BBOF1Q8ND07 529 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 AP1M1Q9BXS5 423 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 PNMA2Q9UL42 364 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 GJA3Q9Y6H8 435 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms