RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZMYND12Q9H0C1 365 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 DNAJC17Q9NVM6 304 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 TBK1Q9UHD2 729 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 ABCA9Q8IUA7 1624 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 EIF4E1BA6NMX2 242 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 FRMPD1Q5SYB0 1578 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 ARHGEF35A5YM69 484 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 TMOD1P28289 359 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 RCAN1P53805 252 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 DR1Q01658 176 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 NTRK3Q16288 839 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 MUM1Q2TAK8 710 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 PSMD1Q99460 953 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 VPS37BQ9H9H4 285 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 AMACRQ9UHK6 382 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 DAPK3O43293 454 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 GDAP1Q8TB36 358 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 TRIM9Q9C026 710 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 METTL14Q9HCE5 456 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 MLXIPLQ9NP71 852 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 HAUS2Q9NVX0 235 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 XDHP47989 1333 aa14.32□□□□□ -0.12
TRAPPC9-201ENST00000389328 RASGRF2O14827 1237 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 BIRC3Q13489 604 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 CDKAL1Q5VV42 579 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 GCNT4Q9P109 453 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 CEP72Q9P209 647 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 COL15A1P39059 1388 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 SNX1Q13596 522 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 UBE2SQ16763 222 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 NUGGCQ68CJ6 796 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 CD248Q9HCU0 757 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 CAPN6Q9Y6Q1 641 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 PPLO60437 1756 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 HDLBPQ00341 1268 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 KCNB1Q14721 858 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 CLUL1Q15846 466 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 DDX42Q86XP3 938 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 THOC1Q96FV9 657 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 ZC3H12CQ9C0D7 883 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 SYNCQ9H7C4 482 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 GNPATO15228 680 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 DPP8Q6V1X1 898 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 SLC44A5Q8NCS7 719 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 KIFAP3Q92845 792 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
TRAPPC9-201ENST00000389328 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 PHF20L1A8MW92 1017 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 IFNB1P01574 187 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 FERP16591 822 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 PRDX5P30044 214 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 SLC16A2P36021 539 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 HERVK_113P62684 666 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 MTA3Q9BTC8 594 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 CCDC188H7C350 402 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 IL6STP40189 918 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 GGT7Q9UJ14 662 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 PASKQ96RG2 1323 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 ACSL3O95573 720 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 CFBP00751 764 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 SP4Q02446 784 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 PDXDC1Q6P996 788 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 HDAC7Q8WUI4 952 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 RAB3IPQ96QF0 476 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 GOLPH3Q9H4A6 298 aa14.3□□□□□ -0.12
TRAPPC9-201ENST00000389328 PRPF6O94906 941 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 ABL1P00519 1130 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 LMNB1P20700 586 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 PDE6BP35913 854 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 BTDP43251 543 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 EIF3BP55884 814 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 PPM1KQ8N3J5 372 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 PLA2G4BP0C869 781 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 SLC20A2Q08357 652 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 VCXQ9H320 206 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 SPATS2LQ9NUQ6 558 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TCP10Q12799 353 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 KCNH2Q12809 1159 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TRIP13Q15645 432 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 ANKRD20A3Q5VUR7 823 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 PAPD7Q5XG87 772 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 RUNDC3BQ96NL0 473 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms