RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 DDX23Q9BUQ8 820 aaKnown RBP12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.418e-8■■□□□ 11.5
THUMPD1-201ENST00000381337 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 TFR2Q9UP52 801 aa12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 HPSEQ9Y251 543 aa12.46□□□□□ -0.41
THUMPD1-201ENST00000381337 DAPK3O43293 454 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 DIAPH2O60879 1101 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 PDHA1P08559 390 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 SRGNP10124 158 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 ERVK-24P63145 666 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 COG7P83436 770 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 MAK16Q9BXY0 300 aaKnown RBP12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 EMILIN3Q9NT22 766 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 PALLDQ8WX93 1383 aa12.46□□□□□ -0.42
THUMPD1-201ENST00000381337 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 SLC1A4P43007 532 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 DYNLL1P63167 89 aaKnown RBP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PODXLO00592 558 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 NDC80O14777 642 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PHBP35232 272 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PSMC4P43686 418 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 GRIN1Q05586 938 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 SNX1Q13596 522 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PTPAQ15257 358 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 SGO2Q562F6 1265 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 UNC13DQ70J99 1090 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 ELOA2Q8IYF1 753 aaPredicted RBP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 STAG2Q8N3U4 1231 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 NYXQ9GZU5 481 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 ZNF148Q9UQR1 794 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 TMOD1P28289 359 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 RCAN1P53805 252 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 SMTNP53814 917 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 TMED2Q15363 201 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 TPH2Q8IWU9 490 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 MYCBPAPQ8TBZ2 947 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
THUMPD1-201ENST00000381337 TULP2O00295 520 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 CASQ2O14958 399 aaPredicted RBP12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 PMS2P54278 862 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ALX1Q15699 326 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 CYB5D1Q6P9G0 228 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 PPM1KQ8N3J5 372 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 MLXIPLQ9NP71 852 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 STOML1Q9UBI4 398 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 AMACRQ9UHK6 382 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ANAPC5Q9UJX4 755 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ATP5HO75947 161 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 MAN1A1P33908 653 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ANTXR2P58335 489 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 KCNB1Q14721 858 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 MAP3K21Q5TCX8 1036 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 PP2D1A8MPX8 630 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 CA4P22748 312 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ITIH3Q06033 890 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 PABPC4Q13310 644 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■□□□□ 11.2
THUMPD1-201ENST00000381337 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 SLITRK6Q9H5Y7 841 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 CPDO75976 1380 aa12.44□□□□□ -0.42
THUMPD1-201ENST00000381337 MAP3K7O43318 606 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 LRRN2O75325 713 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 SATB1Q01826 763 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 CHRNDQ07001 517 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 SEMA3FQ13275 785 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 SCARF1Q14162 830 aa12.43□□□□□ -0.42
THUMPD1-201ENST00000381337 PSMD6Q15008 389 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms