RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	OPLAH	O14841	1288 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	ATP1A3	P13637	1013 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	SP4	Q02446	784 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	DPYD	Q12882	1025 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	PDXDC2P	Q6P474	469 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	TRIML1	Q8N9V2	468 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	LARP4B	Q92615	738 aa	Known RBP	12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF577	Q9BSK1	485 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	GDA	Q9Y2T3	454 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEB3	A0JP26	581 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEC	B2RU33	542 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	UBASH3A	P57075	661 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	FBXO38	Q6PIJ6	1188 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEB	Q6S5H4	581 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	CCDC186	Q7Z3E2	898 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	TPH2	Q8IWU9	490 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF397	Q8NF99	534 aa	Predicted RBP	12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	SLC38A10	Q9HBR0	1119 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	HOXC10	Q9NYD6	342 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF112	Q9UJU3	913 aa		12.99	□□□□□ -0.33
LMO7-204	ENST00000377499	CTIF	O43310	598 aa	Known RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	LMAN1	P49257	510 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	FXR2	P51116	673 aa	Known RBP eCLIP	12.98	□□□□□ -0.33	3e-7	■■□□□ 12.3
LMO7-204	ENST00000377499	RPS6	P62753	249 aa	Known RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	MORC3	Q14149	939 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	PTPN21	Q16825	1174 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	HAUS3	Q68CZ6	603 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	ANKRD13A	Q8IZ07	590 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	EEF2KMT	Q96G04	330 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	CCDC43	Q96MW1	224 aa	Known RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	RMDN3	Q96TC7	470 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	PITPNM2	Q9BZ72	1349 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499		E9PMD0	336 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	SORBS3	O60504	671 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	PEX10	O60683	326 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	BMP6	P22004	513 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	CACNB1	Q02641	598 aa	Predicted RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	BAAT	Q14032	418 aa	Predicted RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	PDIA5	Q14554	519 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	ARMC3	Q5W041	872 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	IGSF22	Q8N9C0	903 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	RBM46	Q8TBY0	533 aa	Known RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	SLC10A4	Q96EP9	437 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	PURB	Q96QR8	312 aa	Known RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TBC1D7	Q9P0N9	293 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF646	O15015	1829 aa	Predicted RBP	12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	MSH4	O15457	936 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TPM3	P06753	285 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TMC6	Q7Z403	805 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	NCAPG2	Q86XI2	1143 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	ANKRD35	Q8N283	1001 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TXLNB	Q8N3L3	684 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	SYNRG	Q9UMZ2	1314 aa		12.98	□□□□□ -0.33
LMO7-204	ENST00000377499	TRAF5	O00463	557 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	PLA2G6	O60733	806 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	CAND2	O75155	1236 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	FANCC	Q00597	558 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	FMR1	Q06787	632 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	GPS2	Q13227	327 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	CEP55	Q53EZ4	464 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	NAIF1	Q69YI7	327 aa	Predicted RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	TAAR1	Q96RJ0	339 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	XPO4	Q9C0E2	1151 aa	Known RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	SNCAIP	Q9Y6H5	919 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEF	A5A3E0	1075 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEI	P0CG38	1075 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEJ	P0CG39	1038 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	PTGS1	P23219	599 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	GRB10	Q13322	594 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	NAALADL2	Q58DX5	795 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEG	Q6S5H5	508 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POTEE	Q6S8J3	1075 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	PNMA8A	Q86V59	439 aa	Predicted RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	HPS3	Q969F9	1004 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	MTR	Q99707	1265 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	NT5C3A	Q9H0P0	336 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	SLC39A2	Q9NP94	309 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	NRBP1	Q9UHY1	535 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	RIPK3	Q9Y572	518 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POLR2A	P24928	1970 aa	Known RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	CCDC189	A1A4V9	331 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	TRIM47	Q96LD4	638 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	MMTAG2	Q9BU76	263 aa	Known RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	CUEDC2	Q9H467	287 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	RRAGC	Q9HB90	399 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	POLD4	Q9HCU8	107 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF215	Q9UL58	517 aa	Predicted RBP	12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	DNM3	Q9UQ16	869 aa		12.97	□□□□□ -0.33
LMO7-204	ENST00000377499	EDIL3	O43854	480 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	DSG3	P32926	999 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	TREML2	Q5T2D2	321 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	NELFB	Q8WX92	580 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	FAM20A	Q96MK3	541 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	SAMSN1	Q9NSI8	373 aa	Known RBP	12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	RGL1	Q9NZL6	768 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	AFG3L2	Q9Y4W6	797 aa		12.96	□□□□□ -0.33
LMO7-204	ENST00000377499	ZNF536	O15090	1300 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms