RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 FSCN1Q16658 493 aaKnown RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 SLC5A5Q92911 643 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 ZNF577Q9BSK1 485 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 BCAS3Q9H6U6 928 aa12.88□□□□□ -0.35
HSPG2-202ENST00000374676 DDX25Q9UHL0 483 aaKnown RBP12.88□□□□□ -0.35
HSPG2-202ENST00000374676 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 MOXD2PA6NHM9 499 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 DNM1LO00429 736 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 SLC37A4O43826 429 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 KPNA6O60684 536 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 HOXD8P13378 290 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-202ENST00000374676 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-202ENST00000374676 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-202ENST00000374676 RESTQ13127 1097 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 KCNA10Q16322 511 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 ETNPPLQ8TBG4 499 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 AFG1LQ8WV93 481 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 RIT2Q99578 217 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-202ENST00000374676 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 PHF24Q9UPV7 400 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 WDR81Q562E7 1941 aa12.87□□□□□ -0.35
HSPG2-202ENST00000374676 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 WNT7AO00755 349 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 MMP3P08254 477 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 ATP2B1P20020 1258 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 BEX3Q00994 111 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 ZNF174Q15697 407 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 DGKDQ16760 1214 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 HAS1Q92839 578 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 GPR20Q99678 358 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-202ENST00000374676 PKD2L1Q9P0L9 805 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 SLC9A2Q9UBY0 812 aa12.86□□□□□ -0.35
HSPG2-202ENST00000374676 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
HSPG2-202ENST00000374676 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
HSPG2-202ENST00000374676 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 PSMD10O75832 226 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 CABYRO75952 493 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 ATG7O95352 703 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
HSPG2-202ENST00000374676 ASGR1P07306 291 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-202ENST00000374676 COL6A1P12109 1028 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 ACLYP53396 1101 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 SOX10P56693 466 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 KRT76Q01546 638 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 ZNF746Q6NUN9 644 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-202ENST00000374676 B3GNT9Q6UX72 402 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 MTMR9Q96QG7 549 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
HSPG2-202ENST00000374676 BRCA2P51587 3418 aa12.85□□□□□ -0.35
HSPG2-202ENST00000374676 LAD1O00515 517 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 NOP56O00567 594 aaKnown RBP12.84□□□□□ -0.35
HSPG2-202ENST00000374676 MARCH6O60337 910 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 SORBS3O60504 671 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 NEMFO60524 1076 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 GAS7O60861 476 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 BRD1O95696 1058 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-202ENST00000374676 MCM7P33993 719 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
HSPG2-202ENST00000374676 CALCRLQ16602 461 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 C4orf32Q8N8J7 132 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
HSPG2-202ENST00000374676 TEKT3Q9BXF9 490 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-202ENST00000374676 PCDHB6Q9Y5E3 794 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 ELP1O95163 1332 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
HSPG2-202ENST00000374676 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-202ENST00000374676 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 CCNE2O96020 404 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 F13A1P00488 732 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 MYL3P08590 195 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 SFNP31947 248 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 DDIT3P35638 169 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 ACTR2P61160 394 aa12.83□□□□□ -0.36
HSPG2-202ENST00000374676 PKP1Q13835 747 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms