RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 TBC1D22BQ9NU19 505 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 KIAA1217Q5T5P2 1943 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 CASP8AP2Q9UKL3 1982 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 FAM237AA0A1B0GTK4 181 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 GAS7O60861 476 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 CCL14Q16627 93 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 B3GNT9Q6UX72 402 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 GPT2Q8TD30 523 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 UIMC1Q96RL1 719 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 TSKSQ9UJT2 592 aa16.5■□□□□ 0.23
SMPDL3B-201ENST00000373888 MCM3APO60318 1980 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 NFASCO94856 1347 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 RBM47A0AV96 593 aaKnown RBP16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 POTEMA6NI47 508 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 SP2Q02086 613 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 TAPT1Q6NXT6 567 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 FSIP1Q8NA03 581 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 SCFD2Q8WU76 684 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 PKD2L1Q9P0L9 805 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
SMPDL3B-201ENST00000373888 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 GOLPH3LQ9H4A5 285 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 DDX41Q9UJV9 622 aaKnown RBP16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 HPSEQ9Y251 543 aa16.48■□□□□ 0.23
SMPDL3B-201ENST00000373888 ARIH2O95376 493 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 PRMT2P55345 433 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 NEDD9Q14511 834 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 TTLL4Q14679 1199 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 GIMAP8Q8ND71 665 aaPredicted RBP16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 TRIB2Q92519 343 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 UNC45AQ9H3U1 944 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 FAM13BQ9NYF5 915 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 NRBP1Q9UHY1 535 aa16.47■□□□□ 0.23
SMPDL3B-201ENST00000373888 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 PFKFB1P16118 471 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 CDC25AP30304 524 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 CYP2C19P33261 490 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 UBA7P41226 1012 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 KRT76Q01546 638 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 MMTAG2Q9BU76 263 aaKnown RBP16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 STK24Q9Y6E0 443 aa16.46■□□□□ 0.23
SMPDL3B-201ENST00000373888 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 ZNF865P0CJ78 1059 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 TXLNAP40222 546 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 NDUFA8P51970 172 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 LY6KQ17RY6 165 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 MFSD14CQ5VZR4 134 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 NCAPH2Q6IBW4 605 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 ZNF746Q6NUN9 644 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCDC73Q6ZRK6 1079 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 SLC9A2Q9UBY0 812 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 KCNH3Q9ULD8 1083 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 EML1O00423 815 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 SLC26A4O43511 780 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 CHMP2AO43633 222 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 CCNE2O96020 404 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 LIG1P18858 919 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 SFNP31947 248 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 JAK3P52333 1124 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 SNW1Q13573 536 aaKnown RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 IQSEC1Q6DN90 963 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 METTL7BQ6UX53 244 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 CABP7Q86V35 215 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 SMAP1Q8IYB5 467 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
SMPDL3B-201ENST00000373888 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms